DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and HMEN_ANOGA

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_317438.3 Gene:HMEN_ANOGA / 1277926 VectorBaseID:AGAP008023 Length:594 Species:Anopheles gambiae


Alignment Length:548 Identity:130/548 - (23%)
Similarity:182/548 - (33%) Gaps:194/548 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PGP-TRTTAAIRVSLPGAAPAIPATATAGSQ--------------SPGAIMPMAAVPLPSHLQLL 56
            |.| |...|:|..|:..........|||..|              |||.|.|...:|.|.|:   
Mosquito   117 PSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQPPAIREPISPGPIHPAVLLPYPQHV--- 178

  Fly    57 GSSAGGVGQPAAITPVSPTAATTVLAQPHSLSPS--TPILTQGAPPAAALGGIFCGGSAAAGPGA 119
               ......||.:.|    |..|.|...:..|||  .||:.|                       
Mosquito   179 ---LHPAHHPALLHP----AYHTGLHHYYQPSPSHPQPIVPQ----------------------- 213

  Fly   120 AAAAATNLNALASQHRLLELSRFGLRGYDLAQ--HMLSQQGAVSKLLGTLRP------------- 169
                        .|...||......|.||:::  .:.|..|:.|.....|.|             
Mosquito   214 ------------PQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLPLHPYHTDSDCSTQDST 266

  Fly   170 ----PGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINR--- 227
                |...|    .:|:|:..|.                   .:|..|.|::...||...:|   
Mosquito   267 SAPSPATYG----DIASPSSASS-------------------AMTTPVTTSSPTGSVYDYSRKAS 308

  Fly   228 ILRNRAAERAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAVPLATPPGGGPAGAGGAL 292
            .|.:|||  ....|:.||||. .:|....:|    |..|      |........||  .|.||..
Mosquito   309 ALDHRAA--LLNGFSAAASYP-KLHEEIINP----PQVP------GEADRIANEGG--TGCGGHG 358

  Fly   293 QPGGSGSSYGSDGNMSSNPNSSNSNTT-----HSNGHNTNSGSGC---GDSSAGSGRLS------ 343
            ..|||.:.:    ||.  |..|...|.     |..|..:.:|||.   |.|:.|||..:      
Mosquito   359 CCGGSATPH----NMP--PLGSLCKTVSQIGQHVAGTGSLNGSGSAANGASNGGSGAPATAKPTP 417

  Fly   344 --LPALSPDSGSRDSRSPDADANRMIDIEGEDSESQD----------------------SDQPKF 384
              :|..:|.|.:..|.|.||......|.:.|.|.::|                      |..|::
Mosquito   418 KPIPKPAPSSETNGSSSQDAGMESSDDAKSETSSTKDGSENGSNLWPAWVYCTRYSDRPSSGPRY 482

  Fly   385 RRN--------------RTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 435
            ||.              ||.||..||..|:.||:::.|.....|:.|:|...|:||::::||.|:
Mosquito   483 RRTKQPKEKGDSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTLSAELGLNEAQIKIWFQNK 547

  Fly   436 RAKWRRHQRVNLIKQRDSPSTSSSPTPL 463
            |||.::              :||...||
Mosquito   548 RAKIKK--------------SSSEKNPL 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 21/117 (18%)
Homeobox 388..440 CDD:278475 22/51 (43%)
HMEN_ANOGAXP_317438.3 Homeobox 499..552 CDD:278475 22/52 (42%)
Engrail_1_C_sig 554..583 CDD:287495 4/8 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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