DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toe and VAX1

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001106175.1 Gene:VAX1 / 11023 HGNCID:12660 Length:334 Species:Homo sapiens


Alignment Length:342 Identity:80/342 - (23%)
Similarity:120/342 - (35%) Gaps:105/342 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 HSNGH----NTNSGSGCGDSSAGSGRLSLPALSPDSG-------------SRDSRSPDADANRMI 367
            ||:..    :.|:.....:|....|.|....|....|             |:.:.:.|.|..|.|
Human    13 HSDAEAARVSKNAHKESRESKGAEGNLPAAFLKEPQGAFSASGAAEDCNKSKSNSAADPDYCRRI 77

  Fly   368 ---DIEGEDSE-----SQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALS 424
               |.:|...|     ..|.|:||  |.||:|:.|||..||.||.:..|.....|.:||.:..||
Human    78 LVRDAKGSIREIILPKGLDLDRPK--RTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLS 140

  Fly   425 EARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPVVSPVSPI----------PVPVP 479
            |.:|:|||.|||.|.::.|      .:||...|     :|:...:..|.:          |..:|
Human   141 ETQVKVWFQNRRTKQKKDQ------GKDSELRS-----VVSETAATCSVLRLLEQGRLLSPPGLP 194

  Fly   480 VAVPESGQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSNQHMEEPAAAVATA 544
            ..:|                           ||.|...||.:...:............|||.|.|
Human   195 ALLP---------------------------PCATGALGSALRGPSLPALGAGAAAGSAAAAAAA 232

  Fly   545 SP-----TASAPLSMGGENSAFRALP--------------MTLPMPMTL----------PTASAA 580
            :|     .:..|.::||......|.|              .:||:|..|          |...|.
Human   233 APGPAGAASPHPPAVGGAPGPGPAGPGGLHAGAPAAGHSLFSLPVPSLLGSVASRLSSAPLTMAG 297

  Fly   581 AFALSFARQYIAKYMGT 597
            :.|.:. ::..|:|:.:
Human   298 SLAGNL-QELSARYLSS 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 25/51 (49%)
VAX1NP_001106175.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 6/27 (22%)
COG5576 66..184 CDD:227863 43/130 (33%)
Homeobox 103..157 CDD:365835 25/53 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..263 6/28 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..334 80/342 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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