DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment toe and LOC101734831

DIOPT Version :9

Sequence 1:	NP_524041.2	Gene:	toe / 39418	FlyBaseID:	FBgn0036285	Length:	640	Species:	Drosophila melanogaster
Sequence 2:	XP_004919129.1	Gene:	LOC101734831 / 101734831	-ID:	-	Length:	191	Species:	Xenopus tropicalis

Alignment Length:	207	Identity:	51/207 - (24%)
Similarity:	73/207 - (35%)	Gaps:	62/207 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   259 YTSFPTWPAHHPLWGAVPLATPP-GGGPAGAGGALQPGGS-------------GSSYGSDGNMSS 309
            ||:. |....:|:     ||.|| ...|:|....|.|...             |.|.|.....:.
Frog    12 YTAL-TLQDDYPM-----LAPPPRNHNPSGMFHDLNPTQEKLQEALMELYSVLGFSQGPPMTRTL 70

  Fly   310 NPNSSNSNT-THSNGHNTNSGSGCGDSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGED 373
            ....:.||| |.|:|.:|.                         .:....|.....|.:    .:
Frog    71 RNGGAESNTETPSSGISTK-------------------------YQVYYQPTKSCKRPL----YE 106

  Fly   374 SESQDSDQPKFR------------RNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEA 426
            .|.:.|.:|:.:            |.||.:|.||...|..:||.:.||....|..:|..|.:.|.
Frog   107 EEQRASKKPRIQIDDHLPTANTRCRKRTIYSKEQTIFLHNQFDLNPYPDFVGRCHIAKVTGIPEP 171

  Fly   427 RVQVWFSNRRAK 438
            |:||||.||||:
Frog   172 RIQVWFQNRRAR 183

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
toe	NP_524041.2	HTH	134..230	CDD:304362
toe	NP_524041.2	Homeobox	388..440	CDD:278475	23/51 (45%)
LOC101734831	XP_004919129.1	HOX	131..184	CDD:197696	24/53 (45%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910