DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and pou5f3.2

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001123406.1 Gene:pou5f3.2 / 100170181 XenbaseID:XB-GENE-919841 Length:459 Species:Xenopus tropicalis


Alignment Length:552 Identity:96/552 - (17%)
Similarity:151/552 - (27%) Gaps:252/552 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GVGQPAAITPVSPTAATTVLAQPHSLSPSTPILTQGAPPAAALGGIFCGGSAAAGPGAAAAAATN 126
            |:|.|                ||.|.:.|| :.::.            |.|...|.|..:|....
 Frog    30 GLGHP----------------QPFSFAFST-LKSEN------------GDSGVQGMGDCSAPVMP 65

  Fly   127 LNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVATPTVV-SKIE 190
            .|::||         |...|    |...:|||      ..:|.|.         .|||:. |:| 
 Frog    66 WNSMAS---------FDHHG----QVETNQQG------NPIRAPS---------PTPTLSDSRI- 101

  Fly   191 QYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINRILRNRAAERAAAEFARAASYGYAIHPTH 255
                        :::|.:                        |.|..:.|.:....|     |:.
 Frog   102 ------------KVKEEV------------------------AHETDSGEESPEPKY-----PSP 125

  Fly   256 PHPYTSFP-TWPAHHPLWGAVPLATPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNS--- 316
            |:|...:| ||.. .|.|...|.|                       |::.| |:||..|.:   
 Frog   126 PNPSLYYPNTWTG-SPFWQVNPTA-----------------------GNNSN-STNPMPSQTLVK 165

  Fly   317 ------NTTHSNGHNTN------------SGSGCGDSSAGSGRLSLPALSPDSGSRDSRSPDADA 363
                  |||:....|.:            ..|.|..:::.:|.::..|.:..:|........:|.
 Frog   166 NGSLPGNTTYPTPANQSPNTPVDCVVSSMESSRCSSANSSNGAINERATTIPNGGMVDGGQSSDN 230

  Fly   364 NRMIDIEGE-------------------------------------------------------- 372
            ...:..|.|                                                        
 Frog   231 EEEVPSESEMEQFAKDLKHKRVSMGYTQADVGYALGVLYGKMFSQTTICRFESLQLSFKNMCQLK 295

  Fly   373 --------DSESQDS-----------DQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLA 418
                    ::|:.|:           .|.:.|:.||.........||..|.|...|......::|
 Frog   296 PFLERWLVEAENNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCSKPGAQEMVQIA 360

  Fly   419 ARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSP-----STSSSP------------------ 460
            ....:.:..|:|||.|||.|.:| |.:..:.:.|..     .|.:||                  
 Frog   361 KELNMDKDVVRVWFCNRRQKGKR-QGMPTVDENDGEGYDVGQTMASPPVGHYSLPQVVTSQGYMA 424

  Fly   461 ------TPLVNPVVSPVSPIPVPVPVAVPESG 486
                  .||...........|.|:|.|:|..|
 Frog   425 APLGSTPPLYASAFHKNELFPQPLPHAMPMGG 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362 14/96 (15%)
Homeobox 388..440 CDD:278475 16/51 (31%)
pou5f3.2NP_001123406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..131 18/109 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 216..238 2/21 (10%)
Pou 238..306 CDD:278582 1/67 (1%)
Homeobox 329..382 CDD:278475 16/52 (31%)
Mtc <378..>440 CDD:296347 10/62 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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