DRSC/TRiP Functional Genomics Resources

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Protein Alignment toe and LOC100008066

DIOPT Version :9

Sequence 1:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_003199819.1 Gene:LOC100008066 / 100008066 -ID:- Length:251 Species:Danio rerio


Alignment Length:228 Identity:63/228 - (27%)
Similarity:85/228 - (37%) Gaps:62/228 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 PTWPAHHPLWGAVPLATPPGGGPAGAGGALQPGG----SGSSYGSDGNMSSNPNSSNSNTTHSNG 323
            |....|.||.|   ::....|...|...||.|||    ......:...||:.|            
Zfish    38 PNIAPHVPLPG---VSLEESGRVFGVSSALLPGGVIRVPAHRPLAPAMMSAAP------------ 87

  Fly   324 HNTNSGSGC---GDSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSDQPKFR 385
                  :.|   .|::....:..||||.|.:.:|....|                .|:...||.:
Zfish    88 ------ALCFPWMDNNRRFPKDRLPALIPFTVTRRIGHP----------------YQNRTPPKRK 130

  Fly   386 RNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRH-------- 442
            :.||:||..|:.||||.|.:..|.....|..||....:::|:|:.||.|||.||||.        
Zfish   131 KPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAG 195

  Fly   443 ----QRVNLIKQRD------SPSTSSSPTPLVN 465
                .|:.|..|.|      |.|.||.|..|.|
Zfish   196 RQQANRMLLQLQADALQKSISESVSSDPLCLHN 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 22/51 (43%)
LOC100008066XP_003199819.1 Homeobox 132..185 CDD:278475 22/52 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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