DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and GLO3

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_011048.1 Gene:GLO3 / 856859 SGDID:S000000924 Length:493 Species:Saccharomyces cerevisiae


Alignment Length:530 Identity:124/530 - (23%)
Similarity:196/530 - (36%) Gaps:158/530 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDI 70
            |::|.|:|....||..||:||..||.|.||.:|:.:|::||..||::|||::||:|.|:|||...
Yeast    15 TQQVFQKLGSNMENRVCFDCGNKNPTWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLDKWTIN 79

  Fly    71 ELEKMKAGGNRNAREFL---EDQEDWNE---------RAPITQRYN-------SKAAALYRDKIA 116
            .|.:.|.|||..||:|.   ..::..|.         .:|:.::|.       .|...||..::.
Yeast    80 NLRRFKLGGNHKARDFFLKNNGKQLLNTANVDAKTKYTSPVAKKYKIHLDKKVQKDMELYPSELV 144

  Fly   117 TLAQGKS-------WDLKEAQGRVGSNNSFSSGGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGG 174
            ...|..|       .|...:..:..|.:.|.|.....||..|.......|......|..|:.|  
Yeast   145 LNGQDSSDSPLDTDSDASRSTSKENSVDDFFSNWQKPSSNSSSKLNVNTGSLAPKNNTTGSTP-- 207

  Fly   175 YQQYQTQEFKDQKEEFFSRRQVENASRPENLPPSQG-GKYAGFGFTREPP-------PKTQSQEL 231
                :|...|       :|..:..|||.:.:..||. .|::....:|:|.       .|:|:::|
Yeast   208 ----KTTVTK-------TRSSILTASRKKPVLNSQDKKKHSILSSSRKPTRLTAKKVDKSQAEDL 261

  Fly   232 FDSTLSTLASGWSLFSTNASKLASTAKEKAVTTVNLASTKIKEGTLLDSVQCGVTDVASKVTDMG 296
            ||               ...|.|...||...|. :.:||||::           .|..|:..:..
Yeast   262 FD---------------QFKKEAQQEKEDEFTN-SSSSTKIRQ-----------NDYDSQFMNNS 299

  Fly   297 KRGWNNLAGSNISSPQGGYND---------------------PNF-------------------E 321
            | |.||.:..:|::....:||                     |.|                   :
Yeast   300 K-GNNNNSIDDINTQPDEFNDFLNDTSNSFDTTRKEQQDTLTPKFAKLGFGMTMNDANDLAKQQK 363

  Fly   322 DSSAYQRSNSVGGNLAGGLGQQSGVSDSDW---GGWQDNGNSKSH----------MTSSSSYH-- 371
            :|....:.....|.:|...|.|..:|....   |.:.:..|.::|          ..|||||.  
Yeast   364 ESQKIAQGPRYTGRIAERYGTQKAISSDQLFGRGSFDEAANREAHDKLKTFDNATSISSSSYFGE 428

  Fly   372 --------NQLSSSSGGGTASAGLTRDADWSGFEATNYQSSETSYQNASSGGSTARRNMKLQDTS 428
                    |.::||..|    ||        .|:..|..:....: |||:       :.:||...
Yeast   429 DKEVDEFGNPINSSGSG----AG--------NFDGRNSNNGFIDF-NASA-------DDELQMLR 473

  Fly   429 QKLSEGFESL 438
            ..:.:|.|.|
Yeast   474 DVVEQGAEKL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 44/125 (35%)
GLO3NP_011048.1 COG5347 9..363 CDD:227651 94/388 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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