DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and GTS1

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_011334.1 Gene:GTS1 / 852694 SGDID:S000003149 Length:396 Species:Saccharomyces cerevisiae


Alignment Length:288 Identity:74/288 - (25%)
Similarity:112/288 - (38%) Gaps:65/288 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RVLQELKPQDEN-SKCFECGTHNPQWVSVTYGIWICLECSGKHRSL-GVH----LSFVRSVTMDK 66
            |.|:||....|| :||.|||...|.|.||..|:::|..|:..||.: |..    .|.|:|::||:
Yeast    15 RELKELINSSENANKCGECGNFYPTWCSVNLGVFLCGRCASVHRKVFGSRDDDAFSNVKSLSMDR 79

  Fly    67 W--KDIELEKMKAGGNRNAREFLEDQE-----DWNERAPITQRYNSKAAALYR---DKIATLAQG 121
            |  :||: |.:..|||:....|...:.     |.::...|.:.|......|.:   |:|.....|
Yeast    80 WTREDID-ELVSLGGNKGNARFWNPKNVPFPFDGDDDKAIVEHYIRDKYILGKFRYDEIKPEDFG 143

  Fly   122 KSWDLKEAQG-RVGSNNSFSSGGSSNSSYQSRPSATGYGGN-GGYQNGGGAEPGGYQQYQTQEFK 184
            ...|..:.:. |....|...|...|:|.|:...:.:.|||: ..:|:.|..    |.: |..|.|
Yeast   144 SRMDDFDGESDRFDERNRSRSRSRSHSFYKGGHNRSDYGGSRDSFQSSGSR----YSR-QLAELK 203

  Fly   185 DQ-------------------------KEEFFSRRQVENASRPENLPP-------SQGGKYAGFG 217
            |.                         .|:..|.|...:|:...:.||       :.|.:.|.|.
Yeast   204 DMGFGDTNKNLDALSSAHGNINRAIDYLEKSSSSRNSVSAAATTSTPPLPRRRATTSGPQPAIFD 268

  Fly   218 FTREPPPKTQSQE---------LFDSTL 236
            .|....|...|..         :||.||
Yeast   269 GTNVITPDFTSNSASFVQAKPAVFDGTL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 38/121 (31%)
GTS1NP_011334.1 COG5347 8..310 CDD:227651 74/288 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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