DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and AGD13

DIOPT Version :10

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_567292.1 Gene:AGD13 / 825881 AraportID:AT4G05330 Length:336 Species:Arabidopsis thaliana


Alignment Length:302 Identity:72/302 - (23%)
Similarity:110/302 - (36%) Gaps:115/302 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDIE 71
            :|.:::|..|.:|..|.:||..:|:|.|...|::|||:|.|.|||||.|:|.|.|||:|:|.|.|
plant    15 KRRIRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDEE 79

  Fly    72 LEKM-KAGGNRNAREFLEDQEDWNERAPITQRYNSKAAALYRDKIATLAQGKSWDLKEAQGRVGS 135
            ::.| :.|||.:|....|        |.:....:.....:..|:.....:.|             
plant    80 VDSMIEIGGNASANSIYE--------AFLPDTCSKPGPDVNHDQRMRFIRAK------------- 123

  Fly   136 NNSFSSGGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVENAS 200
                                                      |:.|||                 
plant   124 ------------------------------------------YELQEF----------------- 129

  Fly   201 RPENLPPS---QGGKYAGFGFTREPPPKTQ--SQELFDSTLSTLASGWSLFSTNASKLASTAKEK 260
                |.||   ..||    |.|:.....|.  |:::.||           |.||:|. .:..:|.
plant   130 ----LKPSLRITSGK----GSTKSSAFLTSSLSRKIMDS-----------FRTNSSS-QTMFQEG 174

  Fly   261 AVTTVNLASTKIKEGTLLDSVQCGVTDVASK----VTDMGKR 298
            .|..:.|....||:||.|     .:.|:.|.    |.::||:
plant   175 MVEFIGLLKVTIKKGTNL-----AIRDMMSSDPYVVLNLGKQ 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap_ArfGap1 6..121 CDD:350059 39/114 (34%)
AGD13NP_567292.1 ArfGap 18..124 CDD:350058 39/168 (23%)
C2_ArfGAP 179..323 CDD:176003 11/38 (29%)

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