DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and git2a

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_005165241.1 Gene:git2a / 793882 ZFINID:ZDB-GENE-060526-267 Length:804 Species:Danio rerio


Alignment Length:544 Identity:111/544 - (20%)
Similarity:176/544 - (32%) Gaps:137/544 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NSK-CFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEKMKAGGNRN 82
            ||: |.:|.|.:|:|.||..|:.||.||...|||||.|.|.||.::...|...:|:.::...|..
Zfish    17 NSEVCADCSTSDPRWASVNRGVLICDECCSVHRSLGRHNSQVRHLSNTSWPPTQLQMVQTLYNNG 81

  Fly    83 AREFLE-------------------DQEDWNERAPITQRYNSKAAALY------RDKIATLAQGK 122
            |....|                   |:...|:...|..:|...|   |      ||..:|.|...
Zfish    82 ANAIWEHTLLDPSSIMSSKRKPNHQDKLHPNKADFIKAKYQMLA---YVHRLPCRDDDSTAAADL 143

  Fly   123 SWDLKEAQGRVGSNN------SFSSGGSSNSSYQSR-------PSATG----------YGGNGGY 164
            |   |:....|.:.|      ..|.|..:|..:..:       .:..|          ||.:.|.
Zfish   144 S---KQLHSSVRTGNLETCLRLLSLGAQANYFHPEKGNTPLHIAAKAGQVCQAELLCVYGADPGA 205

  Fly   165 QNGGGAEP------GGYQ---------QYQTQEFKDQKEEFFSRRQVENASRPENLPPSQGGKYA 214
            .:..|..|      .|:|         ||   |..|:...:...|:.::.|....:.|....:..
Zfish   206 PDSSGKTPINYARQAGHQDLADRLVEIQY---ELTDRLAFYLCGRKPDHKSGQHFIIPQMADRNV 267

  Fly   215 GFGFTR-EPPPKTQSQELFDSTLSTLA-------------SGWSLFSTNASKLASTAKEKAVTTV 265
            ....|. ....|.:.|.|.|.....||             :.| |.:.|.|.|.:.........|
Zfish   268 SVELTEFAKAAKRKLQSLSDHLFEELAMDVYDEVDRRETDAVW-LATQNHSTLVTETTVVPFLPV 331

  Fly   266 NLASTKIKEGTLLDSVQCGVTDVASKVTDMGKRGWNNLAGSNISSPQGGYNDPNFEDSSAYQRSN 330
            |...:..:........:....:.|:.|.|:.........|:.:.||:        ::...:.:| 
Zfish   332 NPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQHGNPVPSPK--------DNVDVFFKS- 387

  Fly   331 SVGGNLAGGLGQQSGVSDSDWGGWQDNGNSKSHMTSSSSYHNQLSSSSGGGTASAGLTRDADWSG 395
              ||:..|...|:....|.|.....::.::...|                |.|....:.|:|.|.
Zfish   388 --GGSRHGSESQEIDQPDYDSVASDEDTDTDLRM----------------GKADRTKSLDSDLSD 434

  Fly   396 --------FEATN-YQSSETSYQNASSGGSTARRNMKL-QDTSQKLSEGFESL--DVKSVKPKTA 448
                    .|..| ..:||...|......|.....::| |...|.|.....||  .|.:.:|..|
Zfish   435 GPVSVQEFLEVKNALSASEAKIQELMKANSNLNEELRLMQKKLQSLQSENSSLRRQVSAQQPYQA 499

  Fly   449 ----------TASSANKGTAEDDA 462
                      :.||.:..::...|
Zfish   500 PGGPDHPNPSSPSSCSSSSSSSSA 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 35/120 (29%)
git2aXP_005165241.1 ArfGap 12..134 CDD:214518 34/119 (29%)
Ank_2 147..239 CDD:289560 16/94 (17%)
ANK <147..230 CDD:238125 13/82 (16%)
ANK repeat 147..175 CDD:293786 5/27 (19%)
ANK repeat 177..207 CDD:293786 4/29 (14%)
GIT_SHD 278..306 CDD:285690 6/27 (22%)
GIT_SHD 342..369 CDD:285690 3/26 (12%)
GIT_CC 426..490 CDD:293167 15/63 (24%)
GIT1_C 632..798 CDD:289013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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