DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArfGAP1 and Arfgap3

DIOPT Version :10

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001344685.1 Gene:Arfgap3 / 66251 MGIID:1913501 Length:525 Species:Mus musculus


Alignment Length:549 Identity:129/549 - (23%)
Similarity:198/549 - (36%) Gaps:142/549 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPRTRRVL---QELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSV 62
            |..|..:.:|   :.|:....|..||:||..||.|.|::||:::|::|||.||||||||||:||.
Mouse     1 MGDPSKQDILAIFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRST 65

  Fly    63 TMD-KWKDIELEKMKAGGNRNAREFLEDQ----EDWNERAPITQRYNSKAAALYRDKIATLAQGK 122
            .:| .|...:|..|:.|||.||..|....    :|.|      .:|||:||.|||:||.|||   
Mouse    66 ELDSNWSWFQLRCMQVGGNSNASSFFHQHGCATKDTN------AKYNSRAAQLYREKIKTLA--- 121

  Fly   123 SWDLKEAQGRVG------------------------SNNSFSSGGSSNSSYQ-SRPSATGYG--- 159
                .:|..|.|                        |:.|....|:..:|.| ...|:|.:|   
Mouse   122 ----TQATRRHGTDLWLDSCAAPPVSPPPKEEDFFASHASLEVSGAMQASAQPESASSTPWGLET 182

  Fly   160 ----GNGGYQNGGGAE----PGGYQQYQTQEFKDQKEEFFSRRQVENASRPENLPPSQGGKYAGF 216
                ..||...|...|    ||.....:......:|              |.......|.|....
Mouse   183 TPEKHEGGPGQGPSVEGLNTPGKAAPAEVSSIIKKK--------------PNQAKKGLGAKKGSL 233

  Fly   217 G--------FTR-----EPPPKTQSQELFDSTLSTLASGWSLFSTNASKLASTAKEKAVT----- 263
            |        ||.     :...|.:.||       .||.|.....:..|.|....|:..::     
Mouse   234 GAQKLTNTSFTEIEKQAQAVDKRKEQE-------DLARGAPKEESIVSSLRLAYKDLEISRKKDE 291

  Fly   264 TVNLASTKIKE----GTLLDSVQCGVT-DVASKVTDMGKRGWNNLAGSNISSPQGGY-NDPN--- 319
            .:||:..|..|    |....|.:.|:: .|.|.:..:.:.      ...::.|:..| .||.   
Mouse   292 RLNLSGQKKVEAERLGMGFGSCRSGISHSVTSDMQTIEQE------SPTLAKPRRKYQEDPEDSY 350

  Fly   320 FEDSSAYQRSNSVGGNLAGGLGQQSGVSDSDWGGWQDNGNSKSHMTSSSSYHNQLSSSSGGGTAS 384
            |..||.:...:|     :........:..|.:..|.|..:|.....||......:.|:......|
Mouse   351 FSSSSKWSEQSS-----SRYFDDPMELRSSSFSSWDDGADSYWKKDSSRDPEPAMRSTGSSDRPS 410

  Fly   385 A---------GLTRDAD-------------WSGFEATNYQSSETSYQNASSGGSTARRNMKLQDT 427
            |         |.|.:|.             :.|.:|.....:....:..|:..|.:  :..|.|.
Mouse   411 ARRKPEYEPIGSTDEAQKKFGNVKAISSDMYFGIQAQTDFETRARLERLSTSSSIS--SADLFDE 473

  Fly   428 SQKLSEGFESLDVKSVKPKTATASSANKG 456
            .:|.:.|  :.::.:|.|.....:...:|
Mouse   474 QRKQTAG--NYNLSNVLPNAPDMAQFKQG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap_ArfGap1 6..121 CDD:350059 54/122 (44%)
Arfgap3NP_001344685.1 PLN03114 1..>242 CDD:178661 78/267 (29%)
ArfGap_ArfGap3 4..123 CDD:350085 55/131 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..206 12/43 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..270 6/27 (22%)

Return to query results.
Submit another query.