DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and SMAP2

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_073570.1 Gene:SMAP2 / 64744 HGNCID:25082 Length:429 Species:Homo sapiens


Alignment Length:477 Identity:99/477 - (20%)
Similarity:158/477 - (33%) Gaps:158/477 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKD 69
            |.:.||..|..:::|..|.:|.:..|:|.|...|::||:.|:|.||:||||:|.|:||.:|:|..
Human    11 RYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQ 75

  Fly    70 IELEKMKAGGNRNAREFLEDQEDWNERAP---------ITQRYNSKAAALYRDKIATL-AQGKSW 124
            .:::.|:..||..|....|.......|.|         |..:|..|.   |.|:...: |..|..
Human    76 EQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKK---YMDRSLDINAFRKEK 137

  Fly   125 DLKEAQG-----------------------------RVGSNN-----------------SFSSGG 143
            |.|..:|                             |..|..                 |.::..
Human   138 DDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSK 202

  Fly   144 SSNSSYQ------SRPSATGYGGN---GGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVENA 199
            :||:..:      |.||.:..|..   |.....|.|                            .
Human   203 TSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSA----------------------------G 239

  Fly   200 SRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFSTNASKLASTAKEKAVTT 264
            |.||||             ...|.|.::|:|:....||. .|..||:.:...::.:.|       
Human   240 SVPENL-------------NLFPEPGSKSEEIGKKQLSK-DSILSLYGSQTPQMPTQA------- 283

  Fly   265 VNLASTKIKEGTLLDSVQCGVTDVASKVTDMGKRGWNNLAGSNISSPQGGYNDPNFEDSSA--YQ 327
            :.:|..::...|...|.. |||..            |::.||.:..|.|....|......|  ..
Human   284 MFMAPAQMAYPTAYPSFP-GVTPP------------NSIMGSMMPPPVGMVAQPGASGMVAPMAM 335

  Fly   328 RSNSVGGNLAGGLGQQSGVSDSDWGGW--------------------QDNGNSKSHMTSSSSYH- 371
            .:..:||..|..:|..:|:..:...|:                    |.|....:...:..::: 
Human   336 PAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYG 400

  Fly   372 -----NQLSSSSGGGTASAGLT 388
                 |...|.|||...:|..|
Human   401 ANGMMNYGQSMSGGNGQAANQT 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 37/115 (32%)
SMAP2NP_073570.1 ArfGap_SMAP2 16..122 CDD:350083 34/105 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..184 5/45 (11%)
Interaction with clathrin heavy chains. /evidence=ECO:0000250 163..232 10/68 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..259 15/82 (18%)
Interaction with PICALM. /evidence=ECO:0000250 340..429 15/83 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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