DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and zgc:92360

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001002715.1 Gene:zgc:92360 / 436988 ZFINID:ZDB-GENE-040718-470 Length:377 Species:Danio rerio


Alignment Length:76 Identity:28/76 - (36%)
Similarity:46/76 - (60%) Gaps:1/76 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKD 69
            |..|.|:.:..:..|..|.:||..||:|.|.:.|::|||.|||.|||:.. :..|:|:.:.:|:|
Zfish     6 RAARNLKHVLQKPGNGSCADCGADNPEWGSCSLGVFICLACSGVHRSIPT-IGKVKSLRLSRWED 69

  Fly    70 IELEKMKAGGN 80
            .|::.:...||
Zfish    70 SEVQFLSECGN 80

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 27/74 (36%)
zgc:92360NP_001002715.1 ArfGap 8..124 CDD:279720 27/74 (36%)
PH1_ADAP 132..240 CDD:270072
PH 134..230 CDD:278594
PH2_ADAP 254..359 CDD:241282
PH 257..358 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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