DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and CG8243

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster


Alignment Length:505 Identity:112/505 - (22%)
Similarity:176/505 - (34%) Gaps:146/505 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASPRTRRV-------LQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFV 59
            |..||:.:       |.::...::|..|.:|....|:|.|...|:::|:.|:|.||:||||:|.|
  Fly     6 AGQRTKLIQEKCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRV 70

  Fly    60 RSVTMDKWKDIELEKMKAGGNRNAREFLEDQEDWNERAP---------ITQRYNSKAAALYRDKI 115
            :||.:|.|...::..::..||..||...|.|.....|.|         |..:|..| ..|.|:.:
  Fly    71 KSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHK-KYLAREWV 134

  Fly   116 ATLAQGKSW-----DLKEAQGRVGSNNSFSSGGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGGY 175
            ........|     :..|.|.|            ...|.|::.:.    |..|...|.|      
  Fly   135 PPSPPKVDWAKEIDEELERQKR------------KKKSTQAQATL----GLAGVAGGSG------ 177

  Fly   176 QQYQTQEFKDQKEEFFSRRQVENASRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLA 240
                     |::....|...::|...|..||..:..:..|..     |..||..:|..|.:|:..
  Fly   178 ---------DKRLSGSSASALKNTPLPAPLPKPKPNQVGGCS-----PKTTQRVQLNSSGVSSAG 228

  Fly   241 S----GWS-----LFSTNASK-LASTAKEKAVTTVNLASTKIKEGTLLDSVQCGVTDVASKVTDM 295
            .    |.|     :.:||||: |.:.:....::..::|....|                    .:
  Fly   229 ESDLLGLSSPTKPIVATNASQDLQNESFTSFLSAESIAGQPDK--------------------PI 273

  Fly   296 GKRG-WNNLAGSNISS----PQGGYNDPNFEDSSAYQRSNSVGGNLAGGLGQQSGVSDS------ 349
            |..| ..||.||..:|    .|..:|          |.|...|||.....|:.|  .||      
  Fly   274 GSNGDAANLMGSKPNSLAQEEQDFFN----------QGSLGAGGNEKDQSGKMS--KDSILALYG 326

  Fly   350 ----------DWGGW----------QDNGNSKSH--MT---SSSSYHNQLSSS----SGGGTASA 385
                      ::||:          |.......|  ||   |.|.|::.:.::    |....:||
  Fly   327 SAPATHNPQMNFGGFTGMAPGGYMHQQQQQQIPHQFMTPPNSVSMYNSPVMAAPNAFSNAAISSA 391

  Fly   386 GLTRDADWSGFEATNYQSSETS-YQNASSGGSTARRNMKLQDTSQKLSEG 434
            .........||....:.|:..| |..|....:|     .|..|:|.:..|
  Fly   392 TAMSMGGSHGFTGAQFPSTGGSPYAAAGQAAAT-----NLMQTNQSILSG 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 36/122 (30%)
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 35/114 (31%)
COG5347 20..300 CDD:227651 77/346 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464127
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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