DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and Agfg2

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006249202.1 Gene:Agfg2 / 304375 RGDID:1306590 Length:488 Species:Rattus norvegicus


Alignment Length:503 Identity:109/503 - (21%)
Similarity:168/503 - (33%) Gaps:152/503 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRVLQELK--PQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLG-VHLSFVRSVTMDKWK 68
            ||| :||.  .|..|..||||......:|.:|.|.::|..|||..|.|. .|.  |:|::|..:.
  Rat    31 RRV-RELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHR--VKSISMTTFT 92

  Fly    69 DIELEKMKAGGN------------------------RNAREFLEDQED---W------------- 93
            :.|:..:::.||                        :..:|||:::.:   |             
  Rat    93 EPEVLFLQSRGNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPEQVKGASYS 157

  Fly    94 -------------NERAPITQRYNSKAAALYRDKIATLAQGKSW-DLKEAQGRVGSNNSFSS--- 141
                         .|..||.........:| .|..:|.:|..|. ..:.||.|.....|.||   
  Rat   158 KGSVSATPVQGSVPEGKPIRTLLGDPVPSL-SDAASTSSQSVSQSQARTAQARSSQPPSHSSTKK 221

  Fly   142 ---------GGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVE 197
                     ||...::.|..|:...:.|.|| ||   ...||:..:...........|.|     
  Rat   222 ASTDLLADIGGDPFAAPQVAPAFASFPGFGG-QN---PSHGGFANFDAFSSSPSSSAFGS----- 277

  Fly   198 NASRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFSTNASKLASTAKEKAV 262
                   ||||     ....|..:|.|  .:..:...:.|..:|..|.|  ..:.||:.::..::
  Rat   278 -------LPPS-----VQTPFQAQPTP--AANRMLTGSYSFGSSQMSAF--GVAPLAAASQPNSL 326

  Fly   263 TTV-NLASTKIKEGTLLDSV---QCGVTDVASKVTDMGKRGWNNLAGSNISSPQGGYNDPNFEDS 323
            ..| .|...::..|.|..||   ...|..:.|.|..:|        ||. ..|.|.:.:| |...
  Rat   327 ADVGGLLEPRMAAGGLPGSVFGMPSQVPALQSAVPGVG--------GST-GLPFGAFTNP-FTTP 381

  Fly   324 SAYQRSNSVGGNLAGGLGQQSGVSDSDWGGWQDNGNSKSHMTSSSSYHNQLSSSSGGGTASAGLT 388
            :..|..::                    ..:|.||     :.|...|        |.|:...||.
  Rat   382 AQPQLPST--------------------NPFQPNG-----IASGPGY--------GMGSVQPGLL 413

  Fly   389 RDADWSGFEATNY-------QSSETSYQNASSGGSTARRNMKLQDTSQ 429
            :.|..||..|:.:       |:.....||.||.|......:..:..||
  Rat   414 QPAPPSGAFASTFPAPVFPTQAGLVEQQNGSSFGDLGTSKLGQRPLSQ 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 35/162 (22%)
Agfg2XP_006249202.1 ArfGap 40..152 CDD:295313 26/113 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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