DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and ARFGAP3

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_055385.3 Gene:ARFGAP3 / 26286 HGNCID:661 Length:516 Species:Homo sapiens


Alignment Length:496 Identity:127/496 - (25%)
Similarity:190/496 - (38%) Gaps:143/496 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPRTRRVL---QELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSV 62
            |..|..:.:|   :.|:....|..||:||..||.|.|:|||:::|::|||.||||||||||:||.
Human     1 MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRST 65

  Fly    63 TMD-KWKDIELEKMKAGGNRNAREFLEDQ----EDWNERAPITQRYNSKAAALYRDKIATLAQGK 122
            .:| .|...:|..|:.|||.:|..|....    .|.|      .:|||:||.|||:||.:||   
Human    66 ELDSNWSWFQLRCMQVGGNASASSFFHQHGCSTNDTN------AKYNSRAAQLYREKIKSLA--- 121

  Fly   123 SWDLKEAQGRVG-------------------------------SNNSFSSGGSSNSSYQSRPSAT 156
                .:|..:.|                               |:.:::|..:..||..|||..|
Human   122 ----SQATRKHGTDLWLDSCVVPPLSPPPKEEDFFASHVSPEVSDTAWASAIAEPSSLTSRPVET 182

  Fly   157 GYGGN-GGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVENASRPENLPPSQGGKYAGFGFTR 220
            ....| ||.:.|...|........|.|.....::           :|.......|.|....|   
Human   183 TLENNEGGQEQGPSVEGLNVPTKATLEVSSIIKK-----------KPNQAKKGLGAKKGSLG--- 233

  Fly   221 EPPPKTQSQELFDSTLSTLASGWSLFSTNASKLAST----------AKEKAVTTVNLASTKIKEG 275
                                         |.|||:|          |.:|.....:||....||.
Human   234 -----------------------------AQKLANTCFNEIEKQAQAADKMKEQEDLAKVVSKEE 269

  Fly   276 TLLDSVQCGVTDVASKVTDMGKRGWNNLAG-SNISSPQGGYNDPNFEDSSAYQRSNSVGGNLAGG 339
            :::.|::....|:.   ..|.|....|::| .|:.|.:.|....|.....    |:||..::. .
Human   270 SIVSSLRLAYKDLE---IQMKKDEKMNISGKKNVDSDRLGMGFGNCRSVI----SHSVTSDMQ-T 326

  Fly   340 LGQQSGVSDSDWGGWQDNGNSKSHMTSSSSYHN---QLSSSSGGGTASAGLTRDADWSGFEATNY 401
            :.|:|.:.......:.|:.:. |:.||||||.:   :|.|||           .:.|.. .:.:|
Human   327 IEQESPIMAKPRKKYNDDSDD-SYFTSSSSYFDEPVELRSSS-----------FSSWDD-SSDSY 378

  Fly   402 QSSETSYQNAS-------SGGSTARRN-----MKLQDTSQK 430
            ...|||....:       |...||||.     ::..|.:||
Human   379 WKKETSKDTETVLKTTGYSDRPTARRKPDYEPVENTDEAQK 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 49/114 (43%)
ARFGAP3NP_055385.3 PLN03114 1..464 CDD:178661 127/496 (26%)
ArfGap 12..116 CDD:279720 48/109 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..199 10/28 (36%)
TMF_DNA_bd 246..301 CDD:289127 13/57 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..346 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..414 5/23 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1155557at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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