DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and SPCC622.14

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_588186.2 Gene:SPCC622.14 / 2539181 PomBaseID:SPCC622.14 Length:321 Species:Schizosaccharomyces pombe


Alignment Length:349 Identity:98/349 - (28%)
Similarity:161/349 - (46%) Gaps:65/349 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEK 74
            |.:|....||.|||:|...||||.|...||:|||:|||:||.|||..|||||:|||.|.:.:::.
pombe     5 LDQLTRLPENKKCFDCDAPNPQWASCNLGIFICLDCSGQHRGLGVEKSFVRSITMDNWSERQVKM 69

  Fly    75 MKAGGNRNAREFLEDQEDWNERAPITQRYNSKAAALYRDKIATLAQGKSWDLKEAQGRVGSNNSF 139
            |:.|||.||:.||.....::....|.::||:..|...|.||.....|..|...:....|.|:.|.
pombe    70 MEVGGNSNAKTFLSTDPMFSAAGSIREKYNTDIAEDLRQKIRAEVDGVEWVKVDRPKSVSSHASV 134

  Fly   140 SSGGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVENASRPEN 204
                :|:|:..:.||.:                           |:..:::|::....|:.||::
pombe   135 ----TSSSTVPTIPSVS---------------------------KEANDKYFAKLGSINSQRPDD 168

  Fly   205 LPPSQGGKYAGFGFTREPPPKTQSQ--------ELFDSTLSTLASGWSLFSTNASKLASTAKEKA 261
            |||||||:|.|||.:....|.:.::        :|..:.:|.|:.||::||.:.|:......:  
pombe   169 LPPSQGGRYQGFGSSNSVNPNSSARNNGGSFLDQLSSNPVSALSHGWNMFSRSVSQQIQDVNK-- 231

  Fly   262 VTTVNLASTKIKEGTLLDSVQCGVTDVASKVTDMGKRGW--------NNLAGSNISSPQGGYN-- 316
             :.:....||:::..........:.:.:|.|.:..|:.:        .|:...|..:.:|.|:  
pombe   232 -SYIQPGITKVQDPETRKDYMNAINNFSSNVQEGAKQSFTQLKSFLDENVYSENPQNTRGTYDAE 295

  Fly   317 ----------DPNFEDSSAYQRSN 330
                      .|..||   |.:.|
pombe   296 IDSPYSALAASPPPED---YSKKN 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 48/103 (47%)
SPCC622.14NP_588186.2 COG5347 1..321 CDD:227651 98/349 (28%)
ArfGap 5..115 CDD:279720 50/109 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I1281
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003790
OrthoInspector 1 1.000 - - oto101678
orthoMCL 1 0.900 - - OOG6_102808
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1743
SonicParanoid 1 1.000 - - X3149
TreeFam 1 0.960 - -
109.750

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