DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and Agap3

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006535736.1 Gene:Agap3 / 213990 MGIID:2183446 Length:1093 Species:Mus musculus


Alignment Length:168 Identity:47/168 - (27%)
Similarity:65/168 - (38%) Gaps:42/168 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPRTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMD 65
            :.:..|...:|.::....||.|.:|...||.|.|:..|..:|:||||.||.||.|||.|||:.:|
Mouse   838 LGNQNTALAVQAVRTVRGNSLCIDCEAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLD 902

  Fly    66 KWKDIELEKMKAGGNRNAREF----------------LEDQEDWNERAPITQRYNSK-------- 106
            .|....|..|.|.||..|...                .|::|.|     |..:|..|        
Mouse   903 DWPPELLAVMTAMGNALANSVWEGALDGYSKPGPEACREEKERW-----IRAKYEQKLFLAPLPS 962

  Fly   107 ---------AAALYRDK----IATLAQGKSWDLKEAQG 131
                     ..|:..|.    :..||.|...::.|..|
Mouse   963 SDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYG 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 40/139 (29%)
Agap3XP_006535736.1 Centaurin_gamma 310..467 CDD:133303
PH_AGAP 583..827 CDD:241281
PRK07003 <645..>756 CDD:235906
ArfGap_AGAP3 843..952 CDD:350080 38/113 (34%)
Ank_2 971..1061 CDD:372319 7/30 (23%)
ANK repeat 971..1001 CDD:293786 7/30 (23%)
ANK repeat 1003..1034 CDD:293786
ANK repeat 1036..1061 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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