DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and Agfg1

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006496493.1 Gene:Agfg1 / 15463 MGIID:1333754 Length:577 Species:Mus musculus


Alignment Length:507 Identity:104/507 - (20%)
Similarity:169/507 - (33%) Gaps:179/507 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLG-VHLSFVRSVTMDKWKDIE 71
            ::|:::.....|.|||:|....|.:|::|.|.::|..|||..|.|. .|.  |:|::|..:...|
Mouse    15 KMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPHR--VKSISMTTFTQQE 77

  Fly    72 LEKMKAGGNRNAREFLEDQEDWNERAPITQRYNSKAAAL--YRD--KIATLAQ----GKSWDLKE 128
            :|.::..||...::.      |      ...::.:::|:  :||  |:....|    .|.|.:..
Mouse    78 IEFLQKHGNEVCKQI------W------LGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPP 130

  Fly   129 AQGRVGSNNSFSSGGSSNSSYQSRP------SATGYGGNGGYQNGGGAEPGGYQQYQTQEFKDQK 187
            .|.:|.::...|..|||.||..|.|      |..|......:.|.|                   
Mouse   131 EQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKG------------------- 176

  Fly   188 EEFFSRRQVENASRPENLPPSQG---GKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFSTN 249
                              .|||.   |:..|         :.|.::.|| .||.|.|  .:|:..
Mouse   177 ------------------TPSQSPVVGRSQG---------QQQEKKQFD-LLSDLGS--DIFAAP 211

  Fly   250 ASKLASTAKEKAVTTVNLASTKIKEGTLLDSVQCGVTDVASKVTDMGKRGWNNLAGSNISSPQGG 314
            |.:..:||                                                         
Mouse   212 APQSTATA--------------------------------------------------------- 219

  Fly   315 YNDPNFEDSSAYQRSNSVGGNLAG--GLGQQSGVSDSDWGGW----------QDNGNSKSHMT-- 365
             |..||...:::...||...:.|.  ..||.||  .|::||:          |..|.|...:.  
Mouse   220 -NFANFAHFNSHAAQNSANADFANFDAFGQSSG--SSNFGGFPTASHSSFQPQTTGGSAGSVNAN 281

  Fly   366 ------------------SSSSYHNQLSSSSGGGTASAGL-TRDADWSGFEATNYQSSETSYQNA 411
                              |:|..|...|:.|...|..||| |.|...:.....|..|:.......
Mouse   282 FAHFDNFPKSSSADFGTFSTSQSHQTASTVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQG 346

  Fly   412 SSGGSTARRN----MKLQDTSQKLSEGFESL-DVKSVKPKTATASSANKGTA 458
            |..|:|.:..    :.:...|...|:.:.:| ::.||....||:|:|...|:
Mouse   347 SGFGTTGKAPVGSVVSVPSHSSASSDKYAALAELDSVFSSAATSSNAYTPTS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 28/110 (25%)
Agfg1XP_006496493.1 COG5347 8..268 CDD:227651 75/375 (20%)
ArfGap_AGFG1 13..128 CDD:350082 32/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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