DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and Asap1

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_006520455.1 Gene:Asap1 / 13196 MGIID:1342335 Length:1223 Species:Mus musculus


Alignment Length:139 Identity:41/139 - (29%)
Similarity:66/139 - (47%) Gaps:18/139 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDI 70
            |:.::::::....|..|.:||:..|.|:|...||..|:||||.||.:|||:|.::|:.:||....
Mouse   529 TKAIIEDVQRLPGNDICCDCGSSEPTWLSTNLGILTCIECSGIHREMGVHISRIQSLELDKLGTS 593

  Fly    71 ELEKMKAGGNRNAREFLE-----------DQEDWNERAP------ITQRYNSKAAALYRDKIATL 118
            ||...|..||.:..:.:|           ...|...|..      :..|::.|..|....|:..|
Mouse   594 ELLLAKNVGNNSFNDIMEANLPSPSPKPTPSSDMTVRKEYITAKYVDHRFSRKTCASSSAKLNEL 658

  Fly   119 AQG-KSWDL 126
            .:. ||.||
Mouse   659 LEAIKSRDL 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 34/123 (28%)
Asap1XP_006520455.1 BAR_ASAP1 138..344 CDD:153325
PH_ASAP 407..513 CDD:270071
ArfGap_ASAP1 528..649 CDD:350073 34/119 (29%)
ANK repeat 692..725 CDD:293786
Ank_2 696..>768 CDD:372319
ANK repeat 727..758 CDD:293786
Atrophin-1 845..>1109 CDD:367360
SH3_ASAP1 1165..1221 CDD:212898
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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