DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and arfgap1

DIOPT Version :10

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001123813.1 Gene:arfgap1 / 100170564 XenbaseID:XB-GENE-948122 Length:404 Species:Xenopus tropicalis


Alignment Length:485 Identity:174/485 - (35%)
Similarity:242/485 - (49%) Gaps:105/485 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPRTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMD 65
            |||||||:||:|::.||||:.|||||..||||||||||||||||||||||.||||||||||||||
 Frog     1 MASPRTRKVLKEVRVQDENNTCFECGAFNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVTMD 65

  Fly    66 KWKDIELEKMKAGGNRNAREFLEDQEDWNERAPITQRYNSKAAALYRDKIATLAQGKSWDLKEAQ 130
            ||||:||||||.|||...|:|||.|:|::....:.::|||:||||||||:||||:|:.|.::.:.
 Frog    66 KWKDVELEKMKVGGNGKFRQFLEMQDDYDPCWSMQEKYNSRAAALYRDKVATLAEGRDWSVETSS 130

  Fly   131 GR---------VGSNNSFSSGGSSNSSYQSRPSATGYGGNG---GYQNGGGAEPGGYQQYQTQEF 183
            .|         :||::...|.||:.:...|...|.....|.   .||:||||             
 Frog   131 ARNWTPPQPKMMGSSSVRPSAGSAQTGSSSGDKAFEDWLNDDMTSYQSGGGA------------- 182

  Fly   184 KDQKEEFFSRRQVENASRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFST 248
                                   .:|..:|.|||.|..||.|  ..:..::.:::|.:|||.|:.
 Frog   183 -----------------------GNQENRYVGFGNTVNPPKK--EDDFLNNAMTSLYTGWSSFTV 222

  Fly   249 NASKLASTAKEKAVTTVNLASTKIKEGTLLDSVQCGVTDVASKVTDMGKRGWNNLAG-------- 305
            .|||.||.|||.|......|:.|:|:|.:||.|..||:.:|.||.....:||.::..        
 Frog   223 GASKFASAAKESASKLGTQATQKVKDGRILDDVTSGVSHLAFKVQGASSKGWRDVTSFFSGKSED 287

  Fly   306 -SNISSPQGGYNDPNFEDSSAYQRSNSVGGNLAGGLGQQSGVSDSDWGGWQDNGNSKSHMTSSSS 369
             ...|:|:|||...|   ...||.: |.|.:.                 |:..|:|:.....|  
 Frog   288 MGQSSAPEGGYQQGN---GDGYQNA-SYGKSF-----------------WETFGSSEEIKKPS-- 329

  Fly   370 YHNQLSSSSGGGTASAGLTRDADWSGFEATNYQSSETSYQNASSGGSTARRNMKLQDTSQKLSEG 434
                 .|.||.           .|:..|.:..:.|..|::...||.::..:|.. .|:.:.....
 Frog   330 -----KSPSGD-----------SWTFPENSTERKSSDSWEVWGSGTTSNNKNSN-SDSWENWDSH 377

  Fly   435 FESLDVKSVKPKTATASSANKGTAEDDAWN 464
            :::.:.|..|      ....|..|.:|.|:
 Frog   378 WDNTEGKGGK------KGGEKVPAAEDGWD 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap_ArfGap1 6..121 CDD:350059 84/114 (74%)
arfgap1NP_001123813.1 COG5347 2..265 CDD:227651 138/300 (46%)
ArfGap_ArfGap1 6..121 CDD:350059 84/114 (74%)

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