DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArfGAP1 and arfgap1

DIOPT Version :9

Sequence 1:NP_524040.2 Gene:ArfGAP1 / 39417 FlyBaseID:FBgn0020655 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001007304.1 Gene:arfgap1 / 100149572 ZFINID:ZDB-GENE-041114-130 Length:394 Species:Danio rerio


Alignment Length:398 Identity:158/398 - (39%)
Similarity:211/398 - (53%) Gaps:73/398 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPRTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMD 65
            ||||||||||:|::.:|||:.|||||..||||||||||||||||||||||.|||||||||||:||
Zfish     1 MASPRTRRVLKEVRTEDENNVCFECGAFNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMD 65

  Fly    66 KWKDIELEKMKAGGNRNAREFLEDQEDWNERAPITQRYNSKAAALYRDKIATLAQGKSWDLKEAQ 130
            ||||:|||||||||||..|.|||.|:|::....:.::|||:||||:|||:||||.||.|.::::.
Zfish    66 KWKDLELEKMKAGGNRKFRMFLELQDDYDPNWSLQEKYNSRAAALFRDKVATLADGKEWSMEDSS 130

  Fly   131 GRVGSNNSFSSGGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQ 195
            .|   |.:.....||.||.....:|.|       ||         ..:..:.|:|...:..:..|
Zfish   131 AR---NWTPPQAKSSLSSTHRSSAAAG-------QN---------HTHSDRAFEDWLSDDVNSYQ 176

  Fly   196 VENASRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFSTNASKLASTAKEK 260
            ...||      .:|..:|.|||.|..||.|  .::..::.::::.||||.|:..|||:||.||:.
Zfish   177 NAGAS------GAQENRYVGFGNTPNPPKK--EEDFINNAMTSIYSGWSNFTVGASKIASIAKDN 233

  Fly   261 AVTTVNLAS-------------------TKIKEGTLLDSVQCGVTDVASKVTDMGKRGWNNLAGS 306
            .....|.|:                   .|:|||.|||.:..|::.:|.||...|.:||.::...
Zfish   234 TSKLANQATLKAAELGQTLNDNVIKPTQEKVKEGRLLDEMAVGISGLAVKVQGAGAKGWKDMTSF 298

  Fly   307 NISSPQGGYNDPNFEDSSAYQR----------------------SNSVGGNLAGGLGQQSGVSDS 349
            ....|.|.     .|.||||:.                      |||........|.:....:..
Zfish   299 FSGKPDGA-----DEGSSAYEEGYQSQDAFGAPAPKRDFWETFGSNSALSGNTEALAEHKPSTGD 358

  Fly   350 DWGGWQDN 357
            .|..|.:|
Zfish   359 GWDAWDNN 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfGAP1NP_524040.2 ArfGap 7..114 CDD:279720 77/106 (73%)
arfgap1NP_001007304.1 ArfGap 7..114 CDD:279720 77/106 (73%)
chaperonin_like <194..>277 CDD:295468 25/84 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587069
Domainoid 1 1.000 173 1.000 Domainoid score I3663
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I3095
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1155557at2759
OrthoFinder 1 1.000 - - FOG0003790
OrthoInspector 1 1.000 - - oto40708
orthoMCL 1 0.900 - - OOG6_102808
Panther 1 1.100 - - LDO PTHR46395
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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