DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and LEU5

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_011865.1 Gene:LEU5 / 856391 SGDID:S000001044 Length:357 Species:Saccharomyces cerevisiae


Alignment Length:387 Identity:105/387 - (27%)
Similarity:165/387 - (42%) Gaps:87/387 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 STDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKV 311
            |.|.:|..|....:|......|.|..|..    :::||      ||||:|:.::|..|||||||:
Yeast     5 SPDSNDSYKHINKNTTQKTSFDRNSFDYI----VRSGL------AGGISGSCAKTLIAPLDRIKI 59

  Fly   312 YLQVQ----TQRMG-----ISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLI 367
            ..|..    |:..|     :....||.:|: |.|..::|:...:|:|.|..|.||.||||::..:
Yeast    60 LFQTSNPHYTKYTGSLIGLVEAAKHIWIND-GVRGFFQGHSATLLRIFPYAAVKFVAYEQIRNTL 123

  Fly   368 RGDDGSRQM-SIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVR 431
               ..|::. |...|..:|:.||..|..|.||:::::.|||.....:...:.....||||:....
Yeast   124 ---IPSKEFESHWRRLVSGSLAGLCSVFITYPLDLVRVRLAYETEHKRVKLGRIIKKIYKEPASA 185

  Fly   432 ----------------SFYRGYVPNILGILPYAGIDLAVYETLKRRYIANHDNNEQPSFL---VL 477
                            :|||||||.:||::||||:....::.|       ||..:.|.|.   ||
Yeast   186 TLIKNDYIPNWFCHWCNFYRGYVPTVLGMIPYAGVSFFAHDLL-------HDVLKSPFFAPYSVL 243

  Fly   478 ------------------------LACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQ 518
                                    |..|..:....|..:||..::|.|||..|.........|.|
Yeast   244 ELSEDDELERVQKKQRRPLRTWAELISGGLAGMASQTAAYPFEIIRRRLQVSALSPKTMYDHKFQ 308

  Fly   519 IPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
                         :::.:...|.::.|:.|.:.|::..::||.|.|:.|:.|||......||
Yeast   309 -------------SISEIAHIIFKERGVRGFFVGLSIGYIKVTPMVACSFFVYERMKWNFGI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 85/321 (26%)
LEU5NP_011865.1 Mito_carr 32..127 CDD:395101 34/108 (31%)
PTZ00169 38..329 CDD:240302 85/320 (27%)
Blue background indicates that the domain is not in the aligned region.

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