DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and MRX21

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_015336.1 Gene:MRX21 / 856121 SGDID:S000006215 Length:326 Species:Saccharomyces cerevisiae


Alignment Length:340 Identity:106/340 - (31%)
Similarity:174/340 - (51%) Gaps:57/340 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 LDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQ----RMGIS 323
            |.:.|..|...||.:::....     .:|||:|||||||..:|.:|:|:.||||:.    ..||.
Yeast     5 LTVLEQPNSIKDFLKQDSNIA-----FLAGGVAGAVSRTVVSPFERVKILLQVQSSTTSYNRGIF 64

  Fly   324 ECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRL---IRGDDGSRQMSIVERFYAG 385
            ..:..:.:|.|::.::||||:|.::|.|.:|.:|..||..|:.   :.|::|..|::..:|.::|
Yeast    65 SSIRQVYHEEGTKGLFRGNGLNCIRIFPYSAVQFVVYEACKKKLFHVNGNNGQEQLTNTQRLFSG 129

  Fly   386 AAAGGISQTIIYPMEVLKTRLAL-------------RRTGQYAGIADAAVKIYKQE-GVRSFYRG 436
            |..||.|....||::::||||::             :...:..||.....:.|:.| |:|..|||
Yeast   130 ALCGGCSVVATYPLDLIKTRLSIQTANLSSLNRSKAKSISKPPGIWQLLSETYRLEGGLRGLYRG 194

  Fly   437 YVPNILGILPYAGIDLAVYETLKRRYIANHDNNEQPSF---LVLLACGSTSSTLGQLCSYPLALV 498
            ..|..||::||..::.||||.|  |....:.::.|||:   |..|..|:.|..:.|..:||..|:
Yeast   195 VWPTSLGVVPYVALNFAVYEQL--REFGVNSSDAQPSWKSNLYKLTIGAISGGVAQTITYPFDLL 257

  Fly   499 RTRLQAQAAETIANQKRKTQIPLKSSDAHSGEE---TMTGLFRKIV---RQEGLTGLYRGITPNF 557
            |.|.|..|.                    .|.|   ..|.::..:|   |.||::|.|:|:..|.
Yeast   258 RRRFQVLAM--------------------GGNELGFRYTSVWDALVTIGRAEGVSGYYKGLAANL 302

  Fly   558 LKVLPAVSISYVVYE 572
            .||:|:.::|::|||
Yeast   303 FKVVPSTAVSWLVYE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 33/91 (36%)
Mito_carr 375..463 CDD:278578 33/101 (33%)
Mito_carr 470..581 CDD:278578 33/112 (29%)
MRX21NP_015336.1 PTZ00169 26..304 CDD:240302 94/299 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I2282
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1061
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto99042
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
TreeFam 00.000 Not matched by this tool.
65.990

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