DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and SAL1

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_014316.3 Gene:SAL1 / 855641 SGDID:S000005027 Length:494 Species:Saccharomyces cerevisiae


Alignment Length:374 Identity:90/374 - (24%)
Similarity:166/374 - (44%) Gaps:87/374 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DEERLER---IFNKLDRDGDGRIDIHDLSAAL----HEFGLSSVYAEKFLQQSDKDQSGNVGFAE 170
            |::|..|   :|.:||..|:|::.:.:|.:|.    |....:....:......|.::...|..::
Yeast     9 DKQRDIRYACLFKELDVKGNGQVTLDNLISAFEKNDHPLKGNDEAIKMLFTAMDVNKDSVVDLSD 73

  Fly   171 FLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDL-GLDIDMDEARNLLT--RMDK----- 227
            |..|....|..:...|..:|.:.|||:.:.|:.....|| ...|..:|..:.|:  :|:|     
Yeast    74 FKKYASNAESQIWNGFQRIDLDHDGKIGINEINRYLSDLDNQSICNNELNHELSNEKMNKFSRFF 138

  Fly   228 --------------------------------DGSLNISFNEWRDFMLLAP---STDIHDLIK-F 256
                                            |..|.:::::||||:||.|   .:.:|.... |
Yeast   139 EWAFPKRKANIALRGQASHKKNTDNDRSKKTTDSDLYVTYDQWRDFLLLVPRKQGSRLHTAYSYF 203

  Fly   257 WRHSTYLDIGE--DMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQR 319
            :..:..:|:..  |:.:.:||.:       .:...:||||:|.:|||||||.||:||:|..:|..
Yeast   204 YLFNEDVDLSSEGDVTLINDFIR-------GFGFFIAGGISGVISRTCTAPFDRLKVFLIARTDL 261

  Fly   320 MGI------------------------SECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAY 360
            ..|                        ::.:..:..:||.::.:.|||:||:|:.||::.||.::
Yeast   262 SSILLNSKTDLLAKNPNADINKISSPLAKAVKSLYRQGGIKAFYVGNGLNVIKVFPESSIKFGSF 326

  Fly   361 EQMKRLIRGDDGSRQMSIVERF---YAGAAAGGISQTIIYPMEVLKTRL 406
            |..|:::...:|.|....:.:|   .||..||..:|..:||::.||.|:
Yeast   327 EVTKKIMTKLEGCRDTKDLSKFSTYIAGGLAGMAAQFSVYPIDTLKFRV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 38/183 (21%)
EFh 116..176 CDD:238008 14/66 (21%)
EFh 186..242 CDD:238008 18/95 (19%)
Mito_carr 285..370 CDD:278578 33/108 (31%)
Mito_carr 375..463 CDD:278578 11/35 (31%)
Mito_carr 470..581 CDD:278578
SAL1NP_014316.3 EF-hand_7 19..77 CDD:290234 11/57 (19%)
EFh 20..76 CDD:298682 11/55 (20%)
EF-hand_7 54..109 CDD:290234 11/54 (20%)
Dockerin_like 62..109 CDD:277547 11/46 (24%)
Mito_carr 231..335 CDD:278578 33/103 (32%)
Mito_carr 343..>402 CDD:278578 11/33 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346713
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1460
OMA 1 1.010 - - QHG55854
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24089
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X287
TreeFam 1 0.960 - -
98.760

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