DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment SCaMC and CPK17

DIOPT Version :9

Sequence 1:	NP_729802.1	Gene:	SCaMC / 39415	FlyBaseID:	FBgn0052103	Length:	583	Species:	Drosophila melanogaster
Sequence 2:	NP_196779.1	Gene:	CPK17 / 831091	AraportID:	AT5G12180	Length:	528	Species:	Arabidopsis thaliana

Alignment Length:	137	Identity:	37/137 - (27%)
Similarity:	74/137 - (54%)	Gaps:	10/137 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   111 IEDEE--RLERIFNKLDRDGDGRIDIHDLSAALHEFG--LSSVYAEKFLQQSDKDQSGNVGFAEF 171
            :.:||  .|:.:|..:|.|..|.|.:.:|...|.:.|  ||....::.::.:|.|.:|.:.:.||
plant   371 LSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEF 435

  Fly   172 ----LHYVR-EHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDGSL 231
                :|..| :.|::|...|.|.||:..|.:.:|||..|.::.|:: |..:.:.:::.:|.|...
plant   436 IAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMN-DGRDIKEIISEVDGDNDG 499

  Fly   232 NISFNEW 238
            .|:::|:
plant   500 RINYDEF 506

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SCaMC	NP_729802.1	FRQ1	100..247	CDD:227455	37/137 (27%)
		EFh	116..176	CDD:238008	17/65 (26%)
		EFh	186..242	CDD:238008	15/53 (28%)
		Mito_carr	285..370	CDD:278578
		Mito_carr	375..463	CDD:278578
		Mito_carr	470..581	CDD:278578
CPK17	NP_196779.1	STKc_CAMK	73..330	CDD:270687
CPK17	NP_196779.1	PTZ00184	371..510	CDD:185504	37/137 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000