DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Slc25a16

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_780403.1 Gene:Slc25a16 / 73132 MGIID:1920382 Length:332 Species:Mus musculus


Alignment Length:309 Identity:100/309 - (32%)
Similarity:158/309 - (51%) Gaps:42/309 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 WWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQT---QRMGISECMHIMLNEGGSRSMWRGNGINV 346
            |.|..:||||||..::|..|||||:||.||...   :.:|:...:..:..:.|...:::|||..:
Mouse    36 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNRHYKHLGVLSTLRAVPQKEGYLGLYKGNGAMM 100

  Fly   347 LKIAPETAFKFAAYEQMKRLIR---GDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLAL 408
            ::|.|..|.:|.|:|..|..|.   |..|.     |.|..||:.||..:....||::|::.|||.
Mouse   101 IRIFPYGAIQFMAFEHYKTFITTKLGVSGH-----VHRLMAGSMAGMTAVICTYPLDVVRVRLAF 160

  Fly   409 RRTGQ--YAGIADAAVKIY-KQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKR---RY---IA 464
            :..|:  |:||..|...|| |:.|...||||.:|.|||:.||||:....:.|||.   .|   :.
Mouse   161 QVKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALL 225

  Fly   465 NHDNNEQPSFLVL-----LACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSS 524
            ...:::.|:.|||     |.||..:..:.|..|||..:.|.|:|..|.           :| :..
Mouse   226 GRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDVTRRRMQLGAV-----------LP-EFE 278

  Fly   525 DAHSGEETMTGLFRKIVRQEGL-TGLYRGITPNFLKVLPAVSISYVVYE 572
            ...:..|||    :.:..|.|: .|||||::.|:::.:|:.::::..||
Mouse   279 KCLTMRETM----KYVYGQHGIRRGLYRGLSLNYIRCIPSQAVAFTTYE 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 31/90 (34%)
Mito_carr 375..463 CDD:278578 37/96 (39%)
Mito_carr 470..581 CDD:278578 30/109 (28%)
Slc25a16NP_780403.1 Mito_carr 33..125 CDD:278578 31/88 (35%)
Solcar 1 34..120 30/83 (36%)
PTZ00169 36..330 CDD:240302 100/309 (32%)
Solcar 2 128..216 37/92 (40%)
Mito_carr 131..214 CDD:278578 34/82 (41%)
Mito_carr 238..330 CDD:278578 27/102 (26%)
Solcar 3 238..328 27/102 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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