DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and slc25a24l

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001003884.1 Gene:slc25a24l / 678557 ZFINID:ZDB-GENE-040923-1 Length:448 Species:Danio rerio


Alignment Length:454 Identity:153/454 - (33%)
Similarity:261/454 - (57%) Gaps:31/454 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 IFNKLDRDGDGRIDIHDLSAALHEFGLSSV--YAEKFLQQSDKDQSGNVGFAEFLHYVREHEKNL 182
            :|.|||::.||.|...:|.:.:...|:..|  ..:..|...||::.|.:.:.|||.|:.:.||..
Zfish     7 LFEKLDKNKDGFISTEELQSEMRRIGVEPVNEKVKAILSSYDKNEDGRLSYQEFLVYMMDKEKKW 71

  Fly   183 VLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDGSLNISFNEWRDFMLLAPS 247
            .:.|..:|:|..|.:|||::::.||:|||.|....|:.::..||||.|:.:.:.|:...:::.|:
Zfish    72 KIDFHAIDRNESGVIDLEDIMTLFKELGLIISKPNAKRIIQMMDKDNSMTVDWEEFLHHVIVNPA 136

  Fly   248 TDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVY 312
            .:|.:|:..|:|:...|:||..::|.:.||:|....:|...::|.|:|.|||||.|||:|.:|..
Zfish   137 ENIGELVSSWKHNLVFDVGESRSIPIELTQEESDLSVWGNFVLAAGLADAVSRTVTAPIDLLKTR 201

  Fly   313 LQV---QTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSR 374
            |||   :...:|..|     |..||.||:|:||.:||||..|::..:...|.|::....|:..: 
Zfish   202 LQVFGSKAVSLGFRE-----LQTGGIRSLWQGNAVNVLKGTPQSTLQCFIYAQLRMYSLGERDN- 260

  Fly   375 QMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVP 439
             :|:.:||..|..:|.::..:.||:||||.||.|:..|.|:|:...|..||:.|.|.:||||:.|
Zfish   261 -LSVYQRFGLGCVSGAVAHAVFYPLEVLKVRLNLQPAGTYSGVLGCAKLIYQSESVAAFYRGFKP 324

  Fly   440 NILGILPYAGIDLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQA 504
            :||.::||||::.||:::: ..::.....:...|.|.|.:..:.:|  ||..|||||::||:.||
Zfish   325 SILCMIPYAGVECAVHQSI-MSWVKQDPEDFGDSKLFLFSFAAFAS--GQATSYPLAVIRTQQQA 386

  Fly   505 QAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISY 568
            ||. .:::|        |..|...|   :||::.|.    |:.|.|.|:..:|::.:|...::|
Zfish   387 QAF-CLSSQ--------KPGDVLQG---LTGIYTKY----GVRGFYNGMGASFVRAVPCALLNY 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 40/128 (31%)
EFh 116..176 CDD:238008 18/57 (32%)
EFh 186..242 CDD:238008 20/55 (36%)
Mito_carr 285..370 CDD:278578 34/87 (39%)
Mito_carr 375..463 CDD:278578 35/87 (40%)
Mito_carr 470..581 CDD:278578 31/99 (31%)
slc25a24lNP_001003884.1 EFh 3..65 CDD:238008 18/57 (32%)
EF-hand_7 5..64 CDD:290234 17/56 (30%)
EF-hand_7 40..95 CDD:290234 17/54 (31%)
EFh 75..131 CDD:238008 20/55 (36%)
EF-hand_7 75..129 CDD:290234 20/53 (38%)
Mito_carr 169..251 CDD:278578 34/86 (40%)
PTZ00169 176..432 CDD:240302 99/281 (35%)
Mito_carr 259..335 CDD:278578 32/77 (42%)
Mito_carr 358..448 CDD:278578 30/95 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24089
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X287
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.880

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