DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCaMC and Slc25a23

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001365996.1 Gene:Slc25a23 / 66972 MGIID:1914222 Length:480 Species:Mus musculus


Alignment Length:497 Identity:246/497 - (49%)
Similarity:328/497 - (65%) Gaps:56/497 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EDEERLERIFNKLDRDGDGRIDIHDLSAALHEF----------GLSSVYAEKFLQQSDKDQSGNV 166
            |..:|..|:|.:||.:.|||:|:|:|...|...          |:||.:        |.|..|.:
Mouse     9 ERRQRWGRLFEELDSNKDGRVDVHELRQGLARLGRGDPDRAQQGVSSDW--------DADPDGGL 65

  Fly   167 GFAEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDGSL 231
            ...||..|::|.|:.|:|.|..||:|:||.:|:.|:..:|:.||:.|.:::|..:|..||:||::
Mouse    66 SLEEFTRYLQEREQRLLLMFHSLDRNQDGHIDVSEIQQSFRALGISISLEQAEKILHSMDRDGTM 130

  Fly   232 NISFNEWRDFMLLAPSTDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAG 296
            .|.:.||||..||....::.|::.||:|||.|||||.:.|||:|:|:|..||:||:.||||.:||
Mouse   131 TIDWQEWRDHFL
LHSLENVEDVLYFWKHSTVLDIGECLTVPDEFSQEEKLTGMWWKQLVAGAVAG 195

  Fly   297 AVSRTCTAPLDRIKVYLQV---QTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFA 358
            |||||.||||||:||::||   ::.|:.|...:..|:.|||..|:||||||||||||||:|.||.
Mouse   196 AVSRTGTAPLDRLKVFMQVHASKSNRLNILGGLRNMIQEGGVLSLWRGNGINVLKIAPESAIKFM 260

  Fly   359 AYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPME-------------VLKTRLALRR 410
            ||||:||.|||.  ...:.:.|||.||:.||..:||||||||             ||||||.|||
Mouse   261 AYEQIKRAIRGQ--QETLHVQERFVAGSLAGATAQTIIYPMEVRRRGWRKIQHGRVLKTRLTLRR 323

  Fly   411 TGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANHDN-NEQPSF 474
            ||||.|:.|.|.:|.::||.|:|||||:||:|||:||||||||||||||.|::..:.: :..|..
Mouse   324 TGQYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNRWLQQYSHESANPGI 388

  Fly   475 LVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEE-TMTGLFR 538
            ||||.||:.|||.||:.||||||||||:||||:                  ...|.: :|.||.|
Mouse   389 LVLLGCGTISSTCGQIASYPLALVRTRMQAQAS------------------IEGGPQVSMVGLLR 435

  Fly   539 KIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
            .|:.|||:.||||||.|||:||:|||||||||||...:|||:
Mouse   436 HILSQEGVWGLYRGIAPNFMKVIPAVSISYVVYENMKQALGV 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 51/144 (35%)
EFh 116..176 CDD:238008 21/69 (30%)
EFh 186..242 CDD:238008 23/55 (42%)
Mito_carr 285..370 CDD:278578 55/87 (63%)
Mito_carr 375..463 CDD:278578 60/100 (60%)
Mito_carr 470..581 CDD:278578 60/112 (54%)
Slc25a23NP_001365996.1 FRQ1 7..142 CDD:227455 49/140 (35%)
PTZ00169 189..475 CDD:240302 170/305 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5237
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 477 1.000 Inparanoid score I1462
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55854
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm42487
orthoMCL 1 0.900 - - OOG6_100689
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.770

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