DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and slc25a25b

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_009299818.1 Gene:slc25a25b / 569227 ZFINID:ZDB-GENE-060526-340 Length:536 Species:Danio rerio


Alignment Length:500 Identity:265/500 - (53%)
Similarity:341/500 - (68%) Gaps:45/500 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PTEIPI----EDEERLERIFNKLDRDGDGRIDIHDLSAALHEFGLSSVYAE--KFLQQSDKDQSG 164
            |.:.|:    |.|.||:.:|..||.:.||.|.::||:..|.:.|:.....|  |.::..|||..|
Zfish    56 PHQCPVCGGPEQEHRLKVLFQILDVNRDGGICVNDLTIGLKKLGVHRTEHELMKVVKAGDKDLDG 120

  Fly   165 NVGFAEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTR----- 224
            .:.|.||:||:|:|||.|.|.|..|||..||.:|.:|::.:.:|||:.|..::|..:|.|     
Zfish   121 QLDFEEFVHYLRDHEKKLRLVFKSLDKKNDGHIDSQEIMQSLRDLGVHISEEQAEKILKRIRRGH 185

  Fly   225 -------MDKDGSLNISFNEWRDFMLLAPSTDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQT 282
                   |||:|::.|.:|||||:.||.|:.:|.::|.:|:|||..|:||.|.|||:||.:|..|
Zfish   186 ICAPIMYMDKNGTMTIDWNEWRDYHLLHPAENIPEIILYWKHSTIFDVGESMLVPDEFTAEEKNT 250

  Fly   283 GLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQR---MGISECMHIMLNEGGSRSMWRGNGI 344
            |:|||||||||.||||||||||||||:||.:||...|   |||:.....|:.|||.||:||||||
Zfish   251 GMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHATRSNSMGIAGGFTQMIREGGLRSLWRGNGI 315

  Fly   345 NVLKIAPETAFKFAAYEQMKRLIRGDDGSRQ--MSIVERFYAGAAAGGISQTIIYPMEVLKTRLA 407
            ||||||||:|.||.||||:||||    ||.|  :.|:||..:|:.||.|:|:.||||||||||||
Zfish   316 NVLKIAPESAIKFMAYEQIKRLI----GSNQETLGILERLVSGSLAGAIAQSSIYPMEVLKTRLA 376

  Fly   408 LRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH-DNNEQ 471
            |.|||||:||||.|..|:|:||:.:||:||:||:|||:||||||||||||||..::... .::..
Zfish   377 LGRTGQYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLKNSWLQRFATDSAD 441

  Fly   472 PSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGL 536
            |...||||||:.|||.|||.||||||||||:||||                 |...|.:.||:||
Zfish   442 PGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQA-----------------SQEGSPQMTMSGL 489

  Fly   537 FRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGIK 581
            ||.|||.||..|||||:.|||:||:|||||||||||.....||::
Zfish   490 FRHIVRTEGAIGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQ 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 60/158 (38%)
EFh 116..176 CDD:238008 23/61 (38%)
EFh 186..242 CDD:238008 25/67 (37%)
Mito_carr 285..370 CDD:278578 62/87 (71%)
Mito_carr 375..463 CDD:278578 59/89 (66%)
Mito_carr 470..581 CDD:278578 63/110 (57%)
slc25a25bXP_009299818.1 EFh 70..129 CDD:238008 21/58 (36%)
EF-hand_7 71..131 CDD:290234 21/59 (36%)
EFh 137..208 CDD:238008 25/70 (36%)
EF-hand_7 138..205 CDD:290234 22/66 (33%)
Mito_carr 253..341 CDD:278578 63/91 (69%)
Mito_carr 343..435 CDD:278578 58/91 (64%)
Mito_carr 441..532 CDD:278578 61/107 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5197
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H62165
Inparanoid 1 1.050 483 1.000 Inparanoid score I1405
OMA 1 1.010 - - QHG55854
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm25152
orthoMCL 1 0.900 - - OOG6_100689
Panther 1 1.100 - - LDO PTHR24089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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