DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and slc25a23a

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_068078018.1 Gene:slc25a23a / 561939 ZFINID:ZDB-GENE-121214-154 Length:486 Species:Danio rerio


Alignment Length:473 Identity:247/473 - (52%)
Similarity:329/473 - (69%) Gaps:24/473 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EDEERL-ERIFNKLDRDGDGRIDIHDLSAALHEFGLS-SVYAEKFLQQSDKDQSGNVGFAEFLHY 174
            :|.|:| ..:|.:||.:.|||:|:::|...|...||| |...|:.::..|.:..|.:.|.||..|
Zfish    18 QDREQLWAELFQQLDLNKDGRVDVNELRIGLAARGLSWSSVEEQIVRAGDINHDGQLDFEEFTEY 82

  Fly   175 VREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDGSLNISFNEWR 239
            :|.|||.|.|.|..||:|.||:||:.|:..:..:||:||.:::|..:|..||||.|:.|.:.|||
Zfish    83 LRSHEKRLRLMFRSLDRNNDGEVDVGEIQQSLHNLGVDITLEQAAKILQSMDKDHSMTIDWIEWR 147

  Fly   240 DFMLLAPSTDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTA 304
            |..|..|..::.::.:||:||..|||||.:.|||:|::||.::|..||.|:||.:||:||||.||
Zfish   148 DHFLFNPLHNMEEIAQFWKHSVMLDIGEHLTVPDEFSEKEKRSGFVWRQLMAGAVAGSVSRTGTA 212

  Fly   305 PLDRIKVYLQVQTQ---RMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRL 366
            ||||:||:|||..|   :..:...:..|:.|||..::||||||||||||||||.||.||||:|||
Zfish   213 PLDRLKVFLQVHGQSSDKGNVWSGLRAMVKEGGLTALWRGNGINVLKIAPETAIKFLAYEQIKRL 277

  Fly   367 IRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVR 431
            :||.:....:.:.|||.||:.||..:||||||||||||||.||:||||:.:||.|.:|.::||||
Zfish   278 MRGSNEGGTLKVHERFVAGSLAGATAQTIIYPMEVLKTRLTLRKTGQYSSVADCAKQILQKEGVR 342

  Fly   432 SFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH-DNNEQPSFLVLLACGSTSSTLGQLCSYPL 495
            :||:||:||:|||:||||||||||||||..::..| :.:..|..|||:.||:.|||.|||.||||
Zfish   343 AFYKGYLPNMLGIIPYAGIDLAVYETLKNAWLQRHTEGSADPGVLVLVGCGTVSSTCGQLASYPL 407

  Fly   496 ALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKV 560
            ||:|||:||||:...|.|.                 :|..|||.||.|||:.||||||.||||||
Zfish   408 ALIRTRMQAQASIKGAPQL-----------------SMLTLFRSIVAQEGVVGLYRGIAPNFLKV 455

  Fly   561 LPAVSISYVVYEYTSRAL 578
            :|||||||||||: .|||
Zfish   456 IPAVSISYVVYEH-MRAL 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056 53/129 (41%)
PTZ00169 290..559 CDD:240302 155/272 (57%)
slc25a23aXP_068078018.1 FRQ1 25..150 CDD:444056 51/124 (41%)
PTZ00169 186..454 CDD:240302 161/284 (57%)

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