DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and DPCoAC

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001287430.1 Gene:DPCoAC / 42429 FlyBaseID:FBgn0067783 Length:365 Species:Drosophila melanogaster


Alignment Length:381 Identity:120/381 - (31%)
Similarity:187/381 - (49%) Gaps:67/381 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LISAFKDLGLDI-DMDEARNLLTRMDKDGSLNISFNEWRDFMLLAPSTDIHDLIKFWRHSTYLDI 265
            :.:|...|..|: |.|.:|..|:..:..|            ::|.|:|.:..:            
  Fly    25 MTTASATLSSDLDDADTSRTQLSPSETSG------------VVLVPATTVTPM------------ 65

  Fly   266 GEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQ-----RMGISEC 325
                      .||..|..:   .|::|..|||:::|..|||||.|:..|::..     |..:...
  Fly    66 ----------RQKIDQVVI---SLISGAAAGALAKTVIAPLDRTKINFQIRNDVPFSFRASLRYL 117

  Fly   326 MHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGD-DGSRQMSIVERFYAGAAAG 389
            .:...|| |..::||||...:.:|.|..|.:|.|:||.:|::..| ||:....  .||.||:.||
  Fly   118 QNTYANE-GVLALWRGNSATMARIVPYAAIQFTAHEQWRRILHVDKDGTNTKG--RRFLAGSLAG 179

  Fly   390 GISQTIIYPMEVLKTRLAL--RRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDL 452
            ..||::.||:::.:.|:|:  |.|| |..:.....||:.:||.|:.:|||...:||::||||...
  Fly   180 ITSQSLTYPLDLARARMAVTDRYTG-YRTLRQVFTKIWVEEGPRTLFRGYWATVLGVIPYAGTSF 243

  Fly   453 AVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKT 517
            ..||||||.|.....|| :|:.||.||.|:.:...||..||||.:||.|:|.....|....:..|
  Fly   244 FTYETLKREYYEVVGNN-KPNTLVSLAFGAAAGAAGQTASYPLDIVRRRMQTMRVNTAGGDRYPT 307

  Fly   518 QIPLKSSDAHSGEETMTGLFRKIVRQEGL-TGLYRGITPNFLKVLPAVSISYVVYE 572
            .:           ||:.    ||.|:||: .|.|:|::.|::|...||.||:..|:
  Fly   308 IL-----------ETLV----KIYREEGVKNGFYKGLSMNWIKGPIAVGISFSTYD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 9/45 (20%)
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008 8/40 (20%)
Mito_carr 285..370 CDD:278578 29/89 (33%)
Mito_carr 375..463 CDD:278578 36/89 (40%)
Mito_carr 470..581 CDD:278578 35/104 (34%)
DPCoACNP_001287430.1 Mito_carr 72..159 CDD:278578 29/90 (32%)
Mito_carr 169..251 CDD:278578 34/84 (40%)
Mito_carr 279..356 CDD:278578 28/85 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442102
Domainoid 1 1.000 66 1.000 Domainoid score I2377
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D51640at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 00.000 Not matched by this tool.
65.980

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