DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Dic1

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001287313.1 Gene:Dic1 / 41640 FlyBaseID:FBgn0027610 Length:280 Species:Drosophila melanogaster


Alignment Length:303 Identity:78/303 - (25%)
Similarity:130/303 - (42%) Gaps:55/303 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 LWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLK 348
            :|:    .||:|...:...|.|||.|||.||.|...:.:::.:..:..|.|....:.|...:||:
  Fly     9 MWF----FGGLASVGAAMVTHPLDLIKVTLQTQQGHLSVAQLIPKLAREQGVLVFYNGLSASVLR 69

  Fly   349 IAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAA--AGGISQTIIYPMEVLKTR------ 405
            ....:..:|..||..|:.:..|....::::     |||:  .|||..|   |.:::..|      
  Fly    70 QLTYSTARFGVYEAGKKYVNTDSFGGKVAL-----AGASGLVGGIVGT---PADMVNVRMQNDVK 126

  Fly   406 LALRRTGQYAGIADAAVKIYKQEGVRSFYRG-YVPNILGILPYAGIDLAVYETLKRRYIAN--HD 467
            |..::...|....|..|::|:|||.:..:.| ......|||...| .:|.|:..|...:|.  ..
  Fly   127 LPPQQRRNYNNAFDGLVRVYRQEGFKRLFSGATAATARGILMTIG-QIAFYDQTKIYLLATPYFQ 190

  Fly   468 NNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEET 532
            :|....|...|..|:.::||.|    ||.:::||                     |.:|..||  
  Fly   191 DNLVTHFTASLVAGTIATTLTQ----PLDVLKTR---------------------SMNAKPGE-- 228

  Fly   533 MTGLFRKIVRQE---GLTGLYRGITPNFLKVLPAVSISYVVYE 572
            ..||: .||:..   |..|.::|..|.|:::.|...|::|..|
  Fly   229 FNGLW-DIVKHTAKLGPLGFFKGYVPAFVRLGPHTIITFVFLE 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 23/84 (27%)
Mito_carr 375..463 CDD:278578 25/96 (26%)
Mito_carr 470..581 CDD:278578 27/106 (25%)
Dic1NP_001287313.1 Mito_carr 10..92 CDD:278578 23/85 (27%)
PTZ00169 13..273 CDD:240302 77/295 (26%)
Mito_carr 89..184 CDD:278578 26/103 (25%)
Mito_carr 189..278 CDD:278578 28/110 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441959
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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