Protein Alignment SCaMC and GC1

DIOPT Version :9

• Sequence 1: NP_729802.1
• Gene: SCaMC / 39415
• FlyBaseID: FBgn0052103
• Length: 583
• Species: Drosophila melanogaster
• Sequence 2: NP_001262490.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Alignment Length: 319
• Identity: 88/319 - (27%)
• Similarity: 140/319 - (43%)
• Gaps: 55/319 - (17%)

  Fly   289 LVAGGIAGAVSRTCTAPLDRIKVYLQVQT-----QRM--GISECMHIMLNEGGSRSMWRGNGINV 346
            ::.|||||.:..||..|||.:|..||.|.     :||  .:.:|........|...|:||:|:|:
  Fly    25 IINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNI 89

  Fly   347 LKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRT 411
            |.|.||.|.|..|.:..:..:...||  ::.:..:..||..||.....:..|||:||  :.::..
  Fly    90 LLITPEKAIKLTANDYFRHKLTTKDG--KLPLTSQMVAGGLAGAFQIIVTTPMELLK--IQMQDA 150

  Fly   412 GQYAGIADAAVK-------------IYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYI 463
            |:.|..|..|.|             :.|.:|:...|:|.....|..:.::.|...::.||.....
  Fly   151 GRVAAAAKLAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGP 215

  Fly   464 ANHDNNEQP----SFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSS 524
            ..:|.:.:.    |||..||.|||::    |...|..:|:|||||                :|.:
  Fly   216 RRNDGSGEAVFWCSFLAGLAAGSTAA----LAVNPFDVVKTRLQA----------------IKKA 260

  Fly   525 DAHSGEETMTGL---FRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
            |   ||:...|:   ..|.::.||.|..::|.....:.:.|...|:..|| |...|.|:
  Fly   261 D---GEKEFKGISDCITKTLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVY-YLGVAEGL 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SCaMC	NP_729802.1	FRQ1	100..247	CDD:227455
		EFh	116..176	CDD:238008
		EFh	186..242	CDD:238008
		Mito_carr	285..370	CDD:278578	30/87 (34%)
		Mito_carr	375..463	CDD:278578	22/100 (22%)
		Mito_carr	470..581	CDD:278578	33/118 (28%)
GC1	NP_001262490.1	Mito_carr	36..113	CDD:278578	25/76 (33%)
		Mito_carr	115..213	CDD:278578	23/101 (23%)
		Mito_carr	226..307	CDD:278578	28/103 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442092
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840