DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and slc25a33

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_998322.1 Gene:slc25a33 / 406436 ZFINID:ZDB-GENE-040426-2183 Length:314 Species:Danio rerio


Alignment Length:329 Identity:91/329 - (27%)
Similarity:145/329 - (44%) Gaps:78/329 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 HLVAGGIAGAVSRTCTAPLDRIKVYL-----------QVQTQRM-------------GISECMHI 328
            ||.|||..|.|....|.||:.:|..|           |||...:             |:.:.:..
Zfish     9 HLFAGGCGGTVGAIMTCPLEVLKTRLQSSGLTLRPVFQVQLGTLNGAGVIRPGSVTPGLLQVLRS 73

  Fly   329 MLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRG----DDGSRQMSIVERFYAGAAAG 389
            :|.:.|.||::||.|.|::.:||..|..||||.:.|....|    :.|     :|....||.|| 
Zfish    74 ILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSKSKETFNGIFVPNSG-----VVHMSSAGFAA- 132

  Fly   390 GISQTIIYPMEVLKTRLALR---RTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGID 451
            .|:.:::.|:.::|||:.|.   |..:.......|..:||.||:|.||||...:      ||||.
Zfish   133 FITNSLMNPIWMVKTRMQLEKKARGEKKMNALQCARYVYKTEGMRGFYRGLTAS------YAGIS 191

  Fly   452 -----LAVYETLKRRYIA-------NHDNNEQPS-FLVLLACGSTSSTLGQLCSYPLALVRTRLQ 503
                 ..:||||| :|:|       :.||::..| ||.|:...:.:.......:||..::||||:
Zfish   192 ETMICFLIYETLK-KYLAQSRFTTPDTDNDKGASDFLGLMFAAAFAKGCASCIAYPHEVIRTRLR 255

  Fly   504 AQAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISY 568
            .:.:        |.:...:::             |.:..:||....|||:.|..::.:|..:|..
Zfish   256 EEGS--------KYKYFFQTA-------------RLVAVEEGYAAFYRGLIPQLIRQIPNTAIVL 299

  Fly   569 VVYE 572
            ..||
Zfish   300 STYE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 85/312 (27%)
slc25a33NP_998322.1 Solcar 1 4..111 32/101 (32%)
Mito_carr 6..116 CDD:395101 33/106 (31%)
Solcar 2 119..206 32/99 (32%)
Mito_carr 122..207 CDD:395101 31/92 (34%)
Solcar 3 224..308 22/101 (22%)
Mito_carr 226..309 CDD:395101 21/99 (21%)
Blue background indicates that the domain is not in the aligned region.

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