DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Dic4

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_649054.1 Gene:Dic4 / 40039 FlyBaseID:FBgn0036808 Length:302 Species:Drosophila melanogaster


Alignment Length:310 Identity:67/310 - (21%)
Similarity:119/310 - (38%) Gaps:53/310 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 WWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKI 349
            ||    .||.|........||:|.:|.::|:|.|:..|...:..:.:..|....:.|....:|:.
  Fly    23 WW----FGGFASMCVAFAVAPIDIVKTHMQIQRQKRSILGTVKRIHSLKGYLGFYDGFSAAILRQ 83

  Fly   350 APETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLAL------ 408
            ...|...|..|:..|::...|    :.|.:.:...|..||........|.:::..|:..      
  Fly    84 MTSTNIHFIVYDTGKKMEYVD----RDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKEPP 144

  Fly   409 --RRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANHDNNEQ 471
              ||  .|..:.|..::|.|:||.::.|:|....:..........:|.|:.:|.....|...|:.
  Fly   145 YKRR--NYKHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRKNISVNDG 207

  Fly   472 PSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGL 536
            .....|.:.|  :|.:....::||.:|||.:.                     ::..||      
  Fly   208 LPLHFLTSLG--TSIISSAITHPLDVVRTIMM---------------------NSRPGE------ 243

  Fly   537 FRKIVRQE------GLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
            ||.:.:..      |:.|.|||..|..::..||.::.:|:||......||
  Fly   244 FRTVFQASVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHFGI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 58/282 (21%)
Dic4NP_649054.1 Mito_carr 26..100 CDD:395101 18/73 (25%)
Mito_carr 104..201 CDD:395101 20/102 (20%)
Mito_carr 211..292 CDD:395101 23/109 (21%)
Blue background indicates that the domain is not in the aligned region.

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