DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Mpcp2

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_524069.2 Gene:Mpcp2 / 39587 FlyBaseID:FBgn0026409 Length:356 Species:Drosophila melanogaster


Alignment Length:307 Identity:74/307 - (24%)
Similarity:129/307 - (42%) Gaps:52/307 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 GIAGAVS----RTCTAPLDRIKVYLQV-QTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPE 352
            ||.|.:|    .|...|||.:|..||| |.:...:.....:.:.|.|:|.:.:|....:|..:.:
  Fly    66 GIGGILSCGTTHTFVVPLDLVKCRLQVDQAKYKNLVHGFKVTVAEEGARGLAKGWFPTLLGYSAQ 130

  Fly   353 TAFKFAAYEQMK---RLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRT--G 412
            ...||..||..|   ..|.|::.:..........|.|:|...:...:.|.|..|.::   :|  |
  Fly   131 GLCKFGLYELFKVKYAEIIGEENAYLYRTSLYLAASASAEFFADIALAPFEAAKVKI---QTIPG 192

  Fly   413 QYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYE---TLKRRYI-----ANHDNN 469
            ......:|..|:.|:|||.:||:|.||..:..:||..:..|.:|   .|..:|:     |:....
  Fly   193 YANNFREAVPKMLKEEGVNAFYKGLVPLWMRQIPYTMMKFACFERTVELLYKYVVPKPRADCTKG 257

  Fly   470 EQPSFLVLLACGSTSSTLGQLCSYPLALVRTRL-QAQAAETIANQKRKTQIPLKSSDAHSGEETM 533
            ||  .:|..|.|..:.....:.|:|..:|.::| ||:.|..|:                      
  Fly   258 EQ--LIVTFAAGYIAGVFCAVVSHPADVVVSKLNQAKGASAIS---------------------- 298

  Fly   534 TGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
                  :.:..|.:|::.|:||..:.:....::.:.:|:....||||
  Fly   299 ------VAKSLGFSGMWNGLTPRIIMIGTLTALQWFIYDGVKVALGI 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 69/284 (24%)
Mpcp2NP_524069.2 Mito_carr 58..142 CDD:395101 22/75 (29%)
Mito_carr <175..245 CDD:395101 21/72 (29%)
Mito_carr 260..338 CDD:395101 18/105 (17%)
Blue background indicates that the domain is not in the aligned region.

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