DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Tpc2

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster


Alignment Length:311 Identity:83/311 - (26%)
Similarity:138/311 - (44%) Gaps:44/311 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 VAGGIAGAVSRTCTAPLDRIKVYLQVQTQRM---------GISECMHIMLNEGGSRSMWRG-NGI 344
            |.||||||.:||.|.|||.:|:..|:|.:.:         |:......:..|.|.|.|:|| |..
  Fly    14 VGGGIAGAATRTITQPLDVLKIRFQMQVEPVTNHKGSKYRGVIHAFKSVYAEEGMRGMFRGHNSG 78

  Fly   345 NVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRL--- 406
            .||.|: ....:|.:|||::.:....|..|:...:..|..|..||.:......|.:|::|::   
  Fly    79 QVLSIS-YALVQFWSYEQLRSMAHQFDYWRERPFLMFFICGGIAGCLGAVAAQPFDVVRTQMVAA 142

  Fly   407 --ALRRT--GQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH- 466
              :.||:  ..:.|:.    |:||.||.....||....::.:.|..|.:...|:.|....:... 
  Fly   143 DPSSRRSQMNTFTGLR----KVYKMEGWMGLSRGLPFTLVQVFPLVGANFLFYKYLNAAVLMAKP 203

  Fly   467 -DNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKT-----QIPLKSSD 525
             |..::.....|...|:.|..|.::..||..|::.|:|..|.:    |:|||     :.|     
  Fly   204 PDQRQEIHGAFLFLNGALSGVLAKMIVYPADLLKKRIQLMAFK----QERKTFGRNPECP----- 259

  Fly   526 AHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSR 576
                  |:.|......|:||:.|.|:|:.|..||.....::.:.:|:...|
  Fly   260 ------TILGCITTTFREEGIGGFYKGMLPTLLKAGLMSAVYFSIYDMFKR 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 79/292 (27%)
Tpc2NP_001246511.1 Mito_carr 23..99 CDD:395101 24/76 (32%)
Mito_carr 108..194 CDD:395101 20/89 (22%)
Mito_carr 216..307 CDD:395101 27/104 (26%)
Blue background indicates that the domain is not in the aligned region.

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