Protein Alignment SCaMC and Shawn

DIOPT Version :10

• Sequence 1: NP_729802.1
• Gene: SCaMC / 39415
• FlyBaseID: FBgn0052103
• Length: 583
• Species: Drosophila melanogaster
• Sequence 2: NP_001027071.1
• Gene: Shawn / 3772641
• FlyBaseID: FBgn0031039
• Length: 387
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 80/335 - (23%)
• Similarity: 130/335 - (38%)
• Gaps: 66/335 - (19%)

  Fly   290 VAGGIAGAVSRTC-TAPLDRIKVYLQVQTQRMGISECM--------HI----------------- 328
            ||....||:...| ..|||.||..||.|.|.:..::|.        ||
  Fly    43 VASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAP 107

  Fly   329 -----------MLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLI---------RGD--- 370
                       :....|..|:|.|....::...|.|...|.||||.|...         |.|
  Fly   108 RFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIA 172

  Fly   371 -DGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFY 434
             |....:..:....||.:...::.|.:.|:|:::|::..:|. .:|.:.....::.:.:||...:
  Fly   173 HDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRM-THAEMFGTIRQVVQSQGVLGLW 236

  Fly   435 RGYVPNILGILPYAGIDLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVR 499
            ||..|.||..:|::||....||.||..:     ...:|:|....|.|:.|.::....:.|..:|:
  Fly   237 RGLPPTILRDVPFSGIYWTCYEYLKSSF-----GVVEPTFSFSFAAGAISGSVAATITTPFDVVK 296

  Fly   500 TRLQAQAAET-IANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPA 563
            |..|.:..|. |.:.....|:..||         :......|.|..|:..::.|:.|...||.||
  Fly   297 THEQIEFGEKFIFSDNPPKQVATKS---------VAMRLASIYRMGGVPAIFSGLGPRLFKVAPA 352

  Fly   564 VSISYVVYEY 573
            .:|....:||
  Fly   353 CAIMISSFEY 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SCaMC	NP_729802.1	FRQ1	114..242	CDD:444056
		PTZ00169	290..559	CDD:240302	73/319 (23%)
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:395101	29/115 (25%)
		Mito_carr	178..265	CDD:395101	22/92 (24%)
		Mito_carr	268..371	CDD:395101	26/104 (25%)