Protein Alignment SCaMC and sea

DIOPT Version :10

• Sequence 1: NP_729802.1
• Gene: SCaMC / 39415
• FlyBaseID: FBgn0052103
• Length: 583
• Species: Drosophila melanogaster
• Sequence 2: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 304
• Identity: 84/304 - (27%)
• Similarity: 136/304 - (44%)
• Gaps: 40/304 - (13%)

  Fly   281 QTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRM-----GISECMHIMLNEGGSRSMWR 340
            |.||  :.:|||||.|.:....|.|.:.:|..||:..:..     ||.:|:...:.|.|...::|
  Fly    31 QVGL--KGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYR 93

  Fly   341 GNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTI--IYPMEVLK 403
            |..:.|....|::|.:|.|:|.:|.  ...|...|:|...:...|..| |:.:.|  :.|||.:|
  Fly    94 GLSVLVYGSIPKSAARFGAFEFLKS--NAVDSRGQLSNSGKLLCGLGA-GVCEAIVAVTPMETIK 155

  Fly   404 TR-LALRRTG--QYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIAN 465
            .: :..:|:|  ::.|.|....:|.|.||:...|:|..|.||.......|...|.|:||..|..:
  Fly   156 VKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGD 220

  Fly   466 HDNNEQPSFLVLL--ACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHS 528
            ......|..:|.:  |....:|..|   :.||.:|:||:|...|....|            .||.
  Fly   221 DHTKPVPKLVVGVFGAIAGAASVFG---NTPLDVVKTRMQGLEASKYKN------------TAHC 270

  Fly   529 GEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYE 572
            ..|        |::.||....|:|..|...:|...|:|::::|:
  Fly   271 AVE--------ILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYD 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SCaMC	NP_729802.1	FRQ1	114..242	CDD:444056
		PTZ00169	290..559	CDD:240302	77/280 (28%)
sea	NP_001027175.1	Mito_carr	34..117	CDD:395101	25/84 (30%)
		Mito_carr	125..220	CDD:395101	29/95 (31%)
		Mito_carr	235..314	CDD:395101	24/95 (25%)