DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SCaMC and sea

DIOPT Version :9

Sequence 1:	NP_729802.1	Gene:	SCaMC / 39415	FlyBaseID:	FBgn0052103	Length:	583	Species:	Drosophila melanogaster
Sequence 2:	NP_001027175.1	Gene:	sea / 3772221	FlyBaseID:	FBgn0037912	Length:	317	Species:	Drosophila melanogaster

Alignment Length:	304	Identity:	84/304 - (27%)
Similarity:	136/304 - (44%)	Gaps:	40/304 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   281 QTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRM-----GISECMHIMLNEGGSRSMWR 340
            |.||  :.:|||||.|.:....|.|.:.:|..||:..:..     ||.:|:...:.|.|...::|
  Fly    31 QVGL--KGIVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYR 93

  Fly   341 GNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTI--IYPMEVLK 403
            |..:.|....|::|.:|.|:|.:|.  ...|...|:|...:...|..| |:.:.|  :.|||.:|
  Fly    94 GLSVLVYGSIPKSAARFGAFEFLKS--NAVDSRGQLSNSGKLLCGLGA-GVCEAIVAVTPMETIK 155

  Fly   404 TR-LALRRTG--QYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIAN 465
            .: :..:|:|  ::.|.|....:|.|.||:...|:|..|.||.......|...|.|:||..|..:
  Fly   156 VKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESLKDLYKGD 220

  Fly   466 HDNNEQPSFLVLL--ACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHS 528
            ......|..:|.:  |....:|..|   :.||.:|:||:|...|....|            .||.
  Fly   221 DHTKPVPKLVVGVFGAIAGAASVFG---NTPLDVVKTRMQGLEASKYKN------------TAHC 270

  Fly   529 GEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYE 572
            ..|        |::.||....|:|..|...:|...|:|::::|:
  Fly   271 AVE--------ILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYD 306

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SCaMC	NP_729802.1	FRQ1	100..247	CDD:227455
		EFh	116..176	CDD:238008
		EFh	186..242	CDD:238008
		Mito_carr	285..370	CDD:278578	25/89 (28%)
		Mito_carr	375..463	CDD:278578	28/92 (30%)
		Mito_carr	470..581	CDD:278578	26/105 (25%)
sea	NP_001027175.1	PTZ00168	34..302	CDD:185494	81/295 (27%)
		Mito_carr	34..117	CDD:278578	25/84 (30%)
		Mito_carr	125..220	CDD:278578	29/95 (31%)
		Mito_carr	235..314	CDD:278578	24/95 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442079
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840