DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCaMC and CG8026

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_724769.2 Gene:CG8026 / 35941 FlyBaseID:FBgn0033391 Length:322 Species:Drosophila melanogaster


Alignment Length:312 Identity:87/312 - (27%)
Similarity:133/312 - (42%) Gaps:47/312 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 WRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQ-------TQRMGISECMHIMLNEGGSRSMWRGNG 343
            :.|||||...|.||.....|||.||:...|.       .|..|:|.....:..:.|.|.:::|..
  Fly    23 YEHLVAGVSGGVVSTLILHPLDLIKIRFAVNDGRTATVPQYRGLSSAFTTIFRQEGFRGLYKGVT 87

  Fly   344 INVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLAL 408
            .||..........|..|..:|..|:|.:.:..:.......|.|.:|.::..:..|:.|:||||.|
  Fly    88 PNVWGSGSSWGLYFMFYNTIKTFIQGGNTTMPLGPTMNMLAAAESGILTLLLTNPIWVVKTRLCL 152

  Fly   409 R----RTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANHDNN 469
            :    .:.:|.|:..|..:|||:||:|..|||:||.:||: .:..|....||.||..|      |
  Fly   153 QCDAASSAEYRGMIHALGQIYKEEGIRGLYRGFVPGMLGV-SHGAIQFMTYEELKNAY------N 210

  Fly   470 EQPSFLV--------LLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDA 526
            |.....:        .||..:.|..:....:||..:||.|||                     |.
  Fly   211 EYRKLPIDTKLATTEYLAFAAVSKLIAAAATYPYQVVRARLQ---------------------DH 254

  Fly   527 HSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRAL 578
            |..........::..|.||..|.|:|:..:..:|:||..::::|||..|..|
  Fly   255 HHRYNGTWDCIKQTWRFEGYRGFYKGLKASLTRVVPACMVTFLVYENVSHFL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 77/287 (27%)
CG8026NP_724769.2 Mito_carr 23..115 CDD:395101 27/91 (30%)
Mito_carr 119..213 CDD:395101 34/100 (34%)
Mito_carr 220..307 CDD:395101 26/108 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.