DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Ucp4C

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster


Alignment Length:331 Identity:71/331 - (21%)
Similarity:137/331 - (41%) Gaps:48/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 FWRHSTYLDIGED-----MNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQV 315
            :| |...|:|.|:     .||.|..|.:.:     ::..|...|...::.:|..|||..|..:||
  Fly     8 YW-HLRSLEIEEEPRFPPTNVADPLTARNL-----FQLYVNTFIGANLAESCVFPLDVAKTRMQV 66

  Fly   316 ---QTQRMG-----ISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKR--LIRGD 370
               |.::.|     ....:..|:...|.:|::.|....|.:.....:.:...|:..:|  |.:.:
  Fly    67 DGEQAKKTGKAMPTFRATLTNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLYDVFRRPFLYQNE 131

  Fly   371 DGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAG-------IADAAVKIYKQE 428
            .....:.|.........||.|:|.:..|.:::|.|:......:..|       :..|.|.||::.
  Fly   132 RNEEVLKIYMALGCSFTAGCIAQALANPFDIVKVRMQTEGRRRQLGYDVRVNSMVQAFVDIYRRG 196

  Fly   429 GVRSFYRGYVPNILGILPYAGIDLAVYETLKRRY--IANHDNNEQPSFLVLLACGSTSSTLGQLC 491
            |:.|.::|..|:.:........|:..|:..||.:  :.:.:......|:..:..|.|:|.|    
  Fly   197 GLPSMWKGVGPSCMRACLMTTGDVGSYDISKRTFKRLLDLEEGLPLRFVSSMCAGLTASVL---- 257

  Fly   492 SYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPN 556
            |.|..::::|:..|              |:..|..:...:......||:||:||:..||:|:.|.
  Fly   258 STPADVIKSRMMNQ--------------PVDESGKNLYYKNSLDCVRKLVREEGVLTLYKGLMPT 308

  Fly   557 FLKVLP 562
            :.::.|
  Fly   309 WFRLGP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 61/287 (21%)
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:395101 15/74 (20%)
Mito_carr 137..232 CDD:395101 21/94 (22%)
Mito_carr 237..329 CDD:395101 22/96 (23%)
Blue background indicates that the domain is not in the aligned region.

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