DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and slc25a16

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_991112.1 Gene:slc25a16 / 324578 ZFINID:ZDB-GENE-030131-3299 Length:321 Species:Danio rerio


Alignment Length:315 Identity:96/315 - (30%)
Similarity:159/315 - (50%) Gaps:42/315 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 WWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQT---QRMGISECMHIMLNEGGSRSMWRGNGINV 346
            |.|...|||:||..:::..|||||:|:.||.|.   :.:|:...:..:..:.|...:::|||..:
Zfish    25 WLRSFTAGGVAGCCAKSTIAPLDRVKILLQAQNPHYKHLGVFATLKAVPKKEGFLGLYKGNGAMM 89

  Fly   347 LKIAPETAFKFAAYEQMKRLIR---GDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLAL 408
            ::|.|..|.:|.|::..|:.:.   |..|.     |.|..||:.||..:....||::|::.|||.
Zfish    90 IRIFPYGAIQFMAFDNYKKFLHTKVGISGH-----VHRLMAGSMAGMTAVICTYPLDVIRARLAF 149

  Fly   409 RRTG--QYAGIADAAVKIY-KQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANHDNN- 469
            :.||  :|:||..|...|| |:.|:..||||.:|.|:|:.||||.....:.|||...:.:.... 
Zfish   150 QVTGHHRYSGIRHAFQTIYHKEGGISGFYRGLIPTIIGMAPYAGFSFFTFGTLKTLGLTHFPEQL 214

  Fly   470 -----EQPSFLVL-----LACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSS 524
                 :.|..|||     |.||..:..:.|..||||.:.|.|:|..|                |.
Zfish   215 GKPSLDNPDVLVLKTQVNLLCGGVAGAIAQTISYPLDVARRRMQLGA----------------SL 263

  Fly   525 DAHSGEETMTGLFRKIVRQEGL-TGLYRGITPNFLKVLPAVSISYVVYEYTSRAL 578
            ..|....::|...:.:..|.|: .|||||::.|:::.:|:.::::..||:..:.|
Zfish   264 PDHDKCCSLTKTLKHVYSQYGVKKGLYRGLSLNYIRCVPSQAVAFTTYEFMKQVL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 27/90 (30%)
Mito_carr 375..463 CDD:278578 36/90 (40%)
Mito_carr 470..581 CDD:278578 31/115 (27%)
slc25a16NP_991112.1 Mito_carr 21..113 CDD:278578 27/87 (31%)
PTZ00169 25..319 CDD:240302 96/315 (30%)
Mito_carr 120..205 CDD:278578 36/84 (43%)
Mito_carr 227..319 CDD:278578 28/108 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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