DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCaMC and Ucp3

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:314 Identity:76/314 - (24%)
Similarity:127/314 - (40%) Gaps:59/314 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 VAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMH--------IMLNEGGSRSMWRGNGINV 346
            :..|.|...:...|.|||..||.||:|.:..|:....:        .|:...|.||.:.|....:
  Rat    18 LGAGTAACFADLLTFPLDTAKVRLQIQGENPGVQSVQYRGVLGTILTMVRTEGPRSPYSGLVAGL 82

  Fly   347 LKIAPETAFKFAAYEQMKRLI--RGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRL-AL 408
            .:.....:.:...|:.:|:..  :|.|.|   |:..|..||...|.::.|...|.:|:|.|. |:
  Rat    83 HRQMSFASIRIGLYDSVKQFYTPKGTDHS---SVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAM 144

  Fly   409 RRTG-----QYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH-- 466
            .|.|     :|.|..||...|.::||||..::|..|||.........::..|:.:|.:.:.:|  
  Rat   145 IRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLDSHLF 209

  Fly   467 DNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEE 531
            .:|....|:.....|..::.:..    |:.:|:||..                           .
  Rat   210 TDNFPCHFVSAFGAGFCATVVAS----PVDVVKTRYM---------------------------N 243

  Fly   532 TMTGLFR-------KIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRAL 578
            ...|.:|       ::|.|||.|..|:|..|:||::.....:.:|.||...|||
  Rat   244 APPGRYRSPLHCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKRAL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 69/293 (24%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:395101 19/88 (22%)
Solcar 1 11..102 19/83 (23%)
Mito_carr 109..206 CDD:395101 30/99 (30%)
Solcar 2 111..202 29/93 (31%)
Mito_carr 209..299 CDD:395101 25/120 (21%)
Solcar 3 211..296 22/115 (19%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.