DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Slc25a25

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_006233993.1 Gene:Slc25a25 / 246771 RGDID:628666 Length:514 Species:Rattus norvegicus


Alignment Length:521 Identity:258/521 - (49%)
Similarity:341/521 - (65%) Gaps:57/521 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DLHEVASSGSILPTEI-----------PIEDEERLERIFNKLDRDGDGRIDIHDLSAALHEFGLS 147
            |....|||.:..|..:           | :.:.||..:|..||.:.||.:.::||:..|...||.
  Rat    16 DATATASSSASSPASVGDPCGGAVCGGP-DHQLRLWSLFQTLDVNRDGGLCVNDLAVGLRRLGLH 79

  Fly   148 SVYAE--KFLQQSDKDQSGNVGFAEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLG 210
            ....|  |.:|..|||..|.:.|.||:||:::|||.|.|.|..|||..||::|.:|::.:.:|||
  Rat    80 RTEGELRKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLG 144

  Fly   211 LDIDMDEARNLLTR------------MDKDGSLNISFNEWRDFMLLAPSTDIHDLIKFWRHSTYL 263
            :.|...:|..:|.|            |||:|::.|.:|||||:.||.|..:|.::|.:|:|||..
  Rat   145 VKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIF 209

  Fly   264 DIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRM-------G 321
            |:||::.|||:||.:|.|||:|||||||||.||||||||||||||:||.:||...|.       |
  Rat   210 DVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGG 274

  Fly   322 ISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGA 386
            .::    |:.|||::|:||||||||||||||:|.||.||||||||:..|  ...:.|.||..||:
  Rat   275 FTQ----MIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSD--QETLRIHERLVAGS 333

  Fly   387 AAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGID 451
            .||.|:|:.||||||||||:|||:||||:|:.|.|.:|..:|||.:||:||:||:|||:||||||
  Rat   334 LAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGID 398

  Fly   452 LAVYETLKRRYIANHD-NNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKR 515
            ||||||||..::..:. |:..|...||||||:.|||.|||.||||||||||:||||         
  Rat   399 LAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQA--------- 454

  Fly   516 KTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
                    |...:.|.||:.||::|:|.||..|||||:.|||:||:|||||||||||.....||:
  Rat   455 --------SIEGAPEVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGV 511

  Fly   581 K 581
            :
  Rat   512 Q 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 60/171 (35%)
EFh 116..176 CDD:238008 24/61 (39%)
EFh 186..242 CDD:238008 25/67 (37%)
Mito_carr 285..370 CDD:278578 59/91 (65%)
Mito_carr 375..463 CDD:278578 56/87 (64%)
Mito_carr 470..581 CDD:278578 60/110 (55%)
Slc25a25XP_006233993.1 EFh_PEF 46..>158 CDD:355382 43/111 (39%)
EFh_PI-PLC 115..>204 CDD:333715 32/88 (36%)
PTZ00169 236..490 CDD:240302 157/276 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5177
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H62165
Inparanoid 1 1.050 478 1.000 Inparanoid score I1419
OMA 1 1.010 - - QHG55854
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm44551
orthoMCL 1 0.900 - - OOG6_100689
Panther 1 1.100 - - LDO PTHR24089
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X287
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

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