DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Slc25a25

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001418431.1 Gene:Slc25a25 / 246771 RGDID:628666 Length:514 Species:Rattus norvegicus


Alignment Length:519 Identity:260/519 - (50%)
Similarity:341/519 - (65%) Gaps:53/519 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DLHEVASSGSILPTEI--PI--------EDEERLERIFNKLDRDGDGRIDIHDLSAALHEFGLSS 148
            |....|||.:..|..:  |.        :.:.||..:|..||.:.||.:.::||:..|...||..
  Rat    16 DATATASSSASSPASVGDPCGGAVCGGPDHQLRLWSLFQTLDVNRDGGLCVNDLAVGLRRLGLHR 80

  Fly   149 VYAE--KFLQQSDKDQSGNVGFAEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGL 211
            ...|  |.:|..|||..|.:.|.||:||:::|||.|.|.|..|||..||::|.:|::.:.:|||:
  Rat    81 TEGELRKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGV 145

  Fly   212 DIDMDEARNLLTR------------MDKDGSLNISFNEWRDFMLLAPSTDIHDLIKFWRHSTYLD 264
            .|...:|..:|.|            |||:|::.|.:|||||:.||.|..:|.::|.:|:|||..|
  Rat   146 KISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFD 210

  Fly   265 IGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMHI- 328
            :||::.|||:||.:|.|||:|||||||||.||||||||||||||:||.:||...|   |..|.| 
  Rat   211 VGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASR---SNNMCII 272

  Fly   329 -----MLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAA 388
                 |:.|||::|:||||||||||||||:|.||.||||||||:..|  ...:.|.||..||:.|
  Rat   273 GGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSD--QETLRIHERLVAGSLA 335

  Fly   389 GGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLA 453
            |.|:|:.||||||||||:|||:||||:|:.|.|.:|..:|||.:||:||:||:|||:||||||||
  Rat   336 GAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLA 400

  Fly   454 VYETLKRRYIANHD-NNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKT 517
            ||||||..::..:. |:..|...||||||:.|||.|||.||||||||||:||||           
  Rat   401 VYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQA----------- 454

  Fly   518 QIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGIK 581
                  |...:.|.||:.||::|:|.||..|||||:.|||:||:|||||||||||.....||::
  Rat   455 ------SIEGAPEVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQ 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056 54/141 (38%)
PTZ00169 290..559 CDD:240302 159/275 (58%)
Slc25a25NP_001418431.1 FRQ1 48..188 CDD:444056 54/139 (39%)
PTZ00169 236..490 CDD:240302 159/275 (58%)

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