DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Slc25a24

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_766273.1 Gene:Slc25a24 / 229731 MGIID:1917160 Length:475 Species:Mus musculus


Alignment Length:483 Identity:245/483 - (50%)
Similarity:328/483 - (67%) Gaps:25/483 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 ILPTEI--PIEDEERLERIFNKLDRDGDGRIDIHDLSAALHEFG--LSSVYAEKFLQQSDKDQSG 164
            :|||..  ..|...|.|.:|..|||:|||.:||.:|...|...|  |.....||.....|.::.|
Mouse     9 VLPTAACHDAEPPTRYETLFRALDRNGDGVVDIGELQQGLQSLGIPLGQDAEEKIFTTGDVNKDG 73

  Fly   165 NVGFAEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDG 229
            .:.|.||:.|:::|||.:.|.|..||||.|||::..|::.:.:.|||.|...:|..:|..:|.||
Mouse    74 KLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEPSEIVQSLQMLGLHISEKQAELILQSIDSDG 138

  Fly   230 SLNISFNEWRDFMLLAPSTDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGI 294
            ::.:.:|||||:.|..|.|||.::|:||:|||.:|||:.:.:||:||:.|.::|.|||.|:|||:
Mouse   139 TMTVDWNEWRDYFLFNPVTDIEEIIRFWKHSTGIDIGDSLTIPDEFTEDEKKSGQWWRQLLAGGV 203

  Fly   295 AGAVSRTCTAPLDRIKVYLQVQ-TQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFA 358
            |||||||.||||||:||.:||. ::.|.|......|:.|||.||:|||||.||:|||||||.||.
Mouse   204 AGAVSRTSTAPLDRLKVMMQVHGSKSMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFW 268

  Fly   359 AYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVK 423
            ||||.|:|:. ::| :::...|||.:|:.||..:||.||||||||||||:.:||||:||...|.|
Mouse   269 AYEQYKKLLT-EEG-QKLGTFERFISGSMAGATAQTFIYPMEVLKTRLAVAKTGQYSGIYGCAKK 331

  Fly   424 IYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH-DNNEQPSFLVLLACGSTSSTL 487
            |.|.||..:||:||:||:|||:|||||||||||.||..::.|. .::..|..:|||:||:.|||.
Mouse   332 ILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTC 396

  Fly   488 GQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRG 552
            |||.||||||||||:||||....|.|.                 :|.|||::||.:||::|||||
Mouse   397 GQLASYPLALVRTRMQAQATVEGAPQL-----------------SMVGLFQRIVSKEGVSGLYRG 444

  Fly   553 ITPNFLKVLPAVSISYVVYEYTSRALGI 580
            |||||:||||||.|||||||...:.||:
Mouse   445 ITPNFMKVLPAVGISYVVYENMKQTLGV 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 55/146 (38%)
EFh 116..176 CDD:238008 23/61 (38%)
EFh 186..242 CDD:238008 23/55 (42%)
Mito_carr 285..370 CDD:278578 54/85 (64%)
Mito_carr 375..463 CDD:278578 54/87 (62%)
Mito_carr 470..581 CDD:278578 61/111 (55%)
Slc25a24NP_766273.1 EF-hand_7 25..84 CDD:290234 21/58 (36%)
EFh 28..85 CDD:238008 21/56 (38%)
EFh 90..149 CDD:238008 22/58 (38%)
EF-hand_7 91..146 CDD:290234 19/54 (35%)
Solcar 1 192..276 54/83 (65%)
Mito_carr 194..281 CDD:278578 54/87 (62%)
PTZ00169 199..470 CDD:240302 165/289 (57%)
Mito_carr 282..374 CDD:278578 54/91 (59%)
Solcar 2 284..369 54/84 (64%)
Mito_carr 381..471 CDD:278578 59/106 (56%)
Solcar 3 381..469 59/104 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5678
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 477 1.000 Inparanoid score I1462
Isobase 1 0.950 - 0 Normalized mean entropy S1460
OMA 1 1.010 - - QHG55854
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm42487
orthoMCL 1 0.900 - - OOG6_100689
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.720

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