DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Slc25a25

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_666230.2 Gene:Slc25a25 / 227731 MGIID:1915913 Length:514 Species:Mus musculus


Alignment Length:519 Identity:260/519 - (50%)
Similarity:341/519 - (65%) Gaps:53/519 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DLHEVASSGSILPTEI--PI--------EDEERLERIFNKLDRDGDGRIDIHDLSAALHEFGLSS 148
            |....|||.:..|..:  |.        :.:.||..:|..||.:.||.:.::||:..|...||..
Mouse    16 DAAATASSSASSPASVGDPCGGAVCGGPDHQLRLWSLFQTLDVNRDGGLCVNDLAVGLRRLGLHR 80

  Fly   149 VYAE--KFLQQSDKDQSGNVGFAEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGL 211
            ...|  |.:|..|||..|.:.|.||:||:::|||.|.|.|..|||..||::|.:|::.:.:|||:
Mouse    81 TEGELRKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGV 145

  Fly   212 DIDMDEARNLLTR------------MDKDGSLNISFNEWRDFMLLAPSTDIHDLIKFWRHSTYLD 264
            .|...:|..:|.|            |||:|::.|.:|||||:.||.|..:|.::|.:|:|||..|
Mouse   146 KISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFD 210

  Fly   265 IGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMHI- 328
            :||::.|||:||.:|.|||:|||||||||.||||||||||||||:||.:||...|   |..|.| 
Mouse   211 VGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASR---SNNMCIV 272

  Fly   329 -----MLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAA 388
                 |:.|||::|:||||||||||||||:|.||.||||||||:..|  ...:.|.||..||:.|
Mouse   273 GGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSD--QETLRIHERLVAGSLA 335

  Fly   389 GGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLA 453
            |.|:|:.||||||||||:|||:||||:|:.|.|.:|..:|||.:||:||:||:|||:||||||||
Mouse   336 GAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLA 400

  Fly   454 VYETLKRRYIANHD-NNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKT 517
            ||||||..::..:. |:..|...||||||:.|||.|||.||||||||||:||||           
Mouse   401 VYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQA----------- 454

  Fly   518 QIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGIK 581
                  |...:.|.||:.||::|:|.||..|||||:.|||:||:|||||||||||.....||::
Mouse   455 ------SIEGAPEVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQ 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 60/170 (35%)
EFh 116..176 CDD:238008 24/61 (39%)
EFh 186..242 CDD:238008 25/67 (37%)
Mito_carr 285..370 CDD:278578 61/90 (68%)
Mito_carr 375..463 CDD:278578 56/87 (64%)
Mito_carr 470..581 CDD:278578 60/110 (55%)
Slc25a25NP_666230.2 EF-hand_7 52..109 CDD:290234 21/56 (38%)
EFh 53..110 CDD:238008 22/56 (39%)
EFh 115..186 CDD:238008 25/70 (36%)
EF-hand_7 116..183 CDD:290234 22/66 (33%)
Mito_carr 231..319 CDD:278578 61/90 (68%)
Mito_carr 321..413 CDD:278578 56/91 (62%)
Mito_carr 419..510 CDD:278578 58/107 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5237
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H62165
Inparanoid 1 1.050 477 1.000 Inparanoid score I1462
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55854
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm42487
orthoMCL 1 0.900 - - OOG6_100689
Panther 1 1.100 - - LDO PTHR24089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.860

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