DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCaMC and Ucp3

DIOPT Version :10

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_033490.1 Gene:Ucp3 / 22229 MGIID:1099787 Length:308 Species:Mus musculus


Alignment Length:314 Identity:80/314 - (25%)
Similarity:129/314 - (41%) Gaps:59/314 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 VAGGIAGAVSRTCTAPLDRIKVYLQVQ--------TQRMGISECMHIMLNEGGSRSMWRGNGINV 346
            :..|.|...:...|.|||..||.||:|        .|..|:...:..|:...|.||.:.|....:
Mouse    18 LGAGTAACFADLLTFPLDTAKVRLQIQGENPGAQSVQYRGVLGTILTMVRTEGPRSPYSGLVAGL 82

  Fly   347 LKIAPETAFKFAAYEQMKRLI--RGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRL-AL 408
            .:.....:.:...|:.:|:..  :|.|.|   |:..|..||...|.::.|...|.:|:|.|. |:
Mouse    83 HRQMSFASIRIGLYDSVKQFYTPKGADHS---SVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAM 144

  Fly   409 RRTG-----QYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH-- 466
            .|.|     :|.|..||...|.::||||..::|..|||.........::..|:.:|.:.:.:|  
Mouse   145 IRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLESHLF 209

  Fly   467 DNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEE 531
            .:|....|:.....|..::.:..    |:.:|:||..              ..||          
Mouse   210 TDNFPCHFVSAFGAGFCATVVAS----PVDVVKTRYM--------------NAPL---------- 246

  Fly   532 TMTGLFR-------KIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRAL 578
               |.:|       |:|.|||.|..|:|..|:||::.....:.:|.||...|||
Mouse   247 ---GRYRSPLHCMLKMVAQEGPTAFYKGFVPSFLRLGAWNVMMFVTYEQLKRAL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 114..242 CDD:444056
PTZ00169 290..559 CDD:240302 73/293 (25%)
Ucp3NP_033490.1 Mito_carr 10..107 CDD:395101 20/88 (23%)
Solcar 1 11..102 20/83 (24%)
Mito_carr 109..206 CDD:395101 30/99 (30%)
Solcar 2 111..202 29/93 (31%)
Mito_carr 209..299 CDD:395101 28/120 (23%)
Solcar 3 211..296 25/115 (22%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.