DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Cabp7

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_620398.1 Gene:Cabp7 / 192650 MGIID:2183437 Length:215 Species:Mus musculus


Alignment Length:127 Identity:34/127 - (26%)
Similarity:53/127 - (41%) Gaps:26/127 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PTEIPIEDEERLERIFNKLDRDGDGRIDIHDLSAALHEFGL--SSVYAEKFLQQSDKDQSGNVGF 168
            |.:||.::.|.:...|...||||:|.|...:|..|:...|.  :.|..|..:|:.|.|..|.|.|
Mouse    27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91

  Fly   169 AEFLHYVREHEKNLVLQFSHLDKNRDG--------KVDLEELISAFKDLGLDIDMDEARNLL 222
            .||:..:...     |..|.:.:...|        |.|:::|           .:||.:.||
Mouse    92 EEFVTLLGPK-----LSTSGIPEKFHGTDFDTVFWKCDMQKL-----------TVDELKRLL 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 34/127 (27%)
EFh 116..176 CDD:238008 20/61 (33%)
EFh 186..242 CDD:238008 9/45 (20%)
Mito_carr 285..370 CDD:278578
Mito_carr 375..463 CDD:278578
Mito_carr 470..581 CDD:278578
Cabp7NP_620398.1 PTZ00184 27..>102 CDD:185504 24/79 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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