DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and F17E5.2

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_510081.3 Gene:F17E5.2 / 181399 WormBaseID:WBGene00008924 Length:531 Species:Caenorhabditis elegans


Alignment Length:528 Identity:258/528 - (48%)
Similarity:358/528 - (67%) Gaps:38/528 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 QNLGLQHAHLATSSTTNTPLAYDLHEVASSGSI-----------LPTEIPIEDEERLERIFNKLD 125
            :|:| :||.      |..|.....|:....||:           |..::..|.|:::..::::||
 Worm    26 KNIG-EHAR------TVQPFKTSKHQPLIQGSVSKEAAIATHSALHFDLTPEKEKKIRDMYDRLD 83

  Fly   126 RDGDGRIDIHDLSAALH-EFGLSSVYAEKFLQQSDKDQSGNVGFAEFLHYVREHEKNLVLQFSHL 189
            .|.||.|||.||:.||. :..:.:..|.|.|::...:.|..|.:|:|.:||..||..|...|..:
 Worm    84 ADNDGSIDIRDLTQALSLQAHIPASVAPKLLERMKSEHSDRVTYADFTNYVIAHEARLAEVFDKI 148

  Fly   190 DKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDGSLNISFNEWRDFMLLAPSTDIHDLI 254
            |.|.||:||:.|:.|..|::|:::|..:|.:::.:||:.||.:::.||::|||||.||||:.|::
 Worm   149 DLNSDGEVDMAEIKSYCKEMGVNLDDQKAMSIVKKMDQSGSSSVNLNEFQDFMLLYPSTDMRDMV 213

  Fly   255 KFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQV---Q 316
            .||||:..:|||||..||:|||.:|:.:|:|||||||||:|||:|||||||.|||||||||   :
 Worm   214 DFWRHNLIIDIGEDGQVPEDFTPQELLSGVWWRHLVAGGVAGAMSRTCTAPFDRIKVYLQVNSTK 278

  Fly   317 TQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVER 381
            |.::|:..|:|::..|||.:|.||||||||:|||||:|.||..|:|:||.::...|..::|.:||
 Worm   279 TNKLGVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWMQEYKGGAELSTIER 343

  Fly   382 FYAGAAAGGISQTIIYPMEVLKTRLALRRTGQY-AGIADAAVKIYKQEGVRSFYRGYVPNILGIL 445
            ..||::||.||||.||||||:|||||||||||. .|:...|.|:|.:||::.||:||:||:|||:
 Worm   344 LLAGSSAGAISQTAIYPMEVMKTRLALRRTGQLDKGMFHFAHKMYTKEGIKCFYKGYLPNLLGII 408

  Fly   446 PYAGIDLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETI 510
            |||||||.|||:||..|...:..:.:|..|.|||||:.|||.|||.|||||||||||||:|    
 Worm   409 PYAGIDLTVYESLKSMYTKYYTEHTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQARA---- 469

  Fly   511 ANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTS 575
            .:.|..||           .:||.|.|:.|::.||.|||||||||||:||:|||||||||||...
 Worm   470 ISPKNSTQ-----------PDTMVGQFKHILQTEGFTGLYRGITPNFMKVIPAVSISYVVYEKVR 523

  Fly   576 RALGIKMS 583
            :.||..|:
 Worm   524 KQLGATMT 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 53/158 (34%)
EFh 116..176 CDD:238008 20/60 (33%)
EFh 186..242 CDD:238008 20/55 (36%)
Mito_carr 285..370 CDD:278578 56/87 (64%)
Mito_carr 375..463 CDD:278578 55/88 (63%)
Mito_carr 470..581 CDD:278578 63/110 (57%)
F17E5.2NP_510081.3 FRQ1 67..206 CDD:227455 50/138 (36%)
EFh 74..160 CDD:298682 31/85 (36%)
EFh 140..201 CDD:238008 21/60 (35%)
Mito_carr 244..333 CDD:278578 56/88 (64%)
PTZ00169 249..526 CDD:240302 169/291 (58%)
Mito_carr 337..429 CDD:278578 56/91 (62%)
Mito_carr 434..527 CDD:278578 61/107 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167697
Domainoid 1 1.000 128 1.000 Domainoid score I3304
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H62165
Inparanoid 1 1.050 496 1.000 Inparanoid score I763
Isobase 1 0.950 - 0 Normalized mean entropy S1460
OMA 1 1.010 - - QHG55854
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm14429
orthoMCL 1 0.900 - - OOG6_100689
Panther 1 1.100 - - LDO PTHR24089
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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