DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and Slc25a41

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_780542.1 Gene:Slc25a41 / 103775 MGIID:2144215 Length:312 Species:Mus musculus


Alignment Length:327 Identity:156/327 - (47%)
Similarity:207/327 - (63%) Gaps:24/327 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 HSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGIS 323
            |...||.||.:.||.|..::| ..|..|:.|::|.:|||||||.||||||.:||:||.:.:....
Mouse     4 HLEVLDTGEQLMVPVDVLEEE-NKGTLWKFLLSGAMAGAVSRTGTAPLDRARVYMQVYSSKSNFR 67

  Fly   324 EC---MHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQMKRLIRGDDGSRQMSIVERFYAG 385
            ..   :..::.|||.||:||||||||||||||.|.||:..||.|....|...|:...  ||..||
Mouse    68 NLLSGLRSLVQEGGVRSLWRGNGINVLKIAPEYAIKFSVCEQSKNFFYGVHSSQLFQ--ERVVAG 130

  Fly   386 AAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGI 450
            :.|..:|||:|.|||||||||.||.||||.|:.|.|.:|.:::|.|:.||||:||:|||:|||..
Mouse   131 SLAVAVSQTLINPMEVLKTRLTLRFTGQYKGLLDCARQILERDGTRALYRGYLPNMLGIIPYACT 195

  Fly   451 DLAVYETLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETIANQKR 515
            ||||||.|:..:.....:.:.||.||.|:..:.|:|.||:.||||.|||||:|||  :|:     
Mouse   196 DLAVYELLQCLWQKLGRDMKDPSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQ--DTV----- 253

  Fly   516 KTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVVYEYTSRALGI 580
                       .....||.|:|::|:.|:|..|||||:||..||||||..|||:|||...:.||:
Mouse   254 -----------EGSNPTMQGVFKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKKTLGV 307

  Fly   581 KM 582
            ::
Mouse   308 QV 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 45/87 (52%)
Mito_carr 375..463 CDD:278578 49/87 (56%)
Mito_carr 470..581 CDD:278578 50/110 (45%)
Slc25a41NP_780542.1 PTZ00169 23..305 CDD:240302 146/302 (48%)
Mito_carr 25..116 CDD:278578 46/90 (51%)
Solcar 1. /evidence=ECO:0000255 27..113 46/85 (54%)
Solcar 2. /evidence=ECO:0000255 121..206 49/86 (57%)
Mito_carr 123..209 CDD:278578 49/87 (56%)
Mito_carr 215..306 CDD:278578 48/108 (44%)
Solcar 3. /evidence=ECO:0000255 217..304 48/104 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0036
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

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